Gene detail

Detailed information of evm.model.ptg000024l.268 in Aurelia coerulea

Genomic Location: chr16:15687759...15713658
NR annotation: XP_002170516.2, anoctamin-10 [Hydra vulgaris]
Species abbreviation ACOER · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.ptg000024l.268

ATGGCCGTCAACAAAGAGAGATATCTTTTATTTCTCACCGAAGAAGTGACTAAAGATGCGAAAGATTACCTTTTTCAATGCATAGAAAGCCATGGACTCATTGCAGAAGAAGAATCTTGCCCAGGACAATCAGTTATCGTAGTTGGAGCACCTTTCAACAGACTCTGTGAGGAGGCAGAACTGATTGAAATTGACAAAAAATTGAAGGGAAAAGAAAAGTATCAAGAATTTTATGTTGATGGATTCAATGAATTTGAAGGAAGTGACAGCAAGGAAACATTCTTCACTCCTGCAGAAGCGTCATTGCTGTTGTACAATTGCCTCAATAAGGTTTCATTTGAAAGGGAAAAGTTTCTAAAGTATGGAATTAAGAAGTTCAAGGTTCAAGAGAGCATCATCAGTGGCTGTTTGCACTCAAAACCACCAATTTTAGAAGCAGTGACACCAATGCACTCAGCGGAAGAAAGAGCAAAGTTGTGGAAAGCTGCTAAGAAAAATCCCTTTGTTTTCCCATTGGATGATATTCAAAAGTACTATGGGGAAGAAGTTTGTTTTTACTTCGCATGGATGAATTTTTTCACTTGGTCTCTGATACCAGTGGCTTTATTTGGATTGTTTCTATTCTTCCATCGACCTCGTGGGATTACTGTTGATGATAGCCCTTACCTGCCTGCCTATGCATTGTTAATGGCATTATGGACAATCTACTTTTGCAAGAGCTGGAGACGACAGGAAAGTGAGCTAGCTTTGAAATGGAATGCAACACAGATAGAACGAAAAGAAATCATTCGCCCAGAATTCTATGGAATAATTCGAACGAGCCCAGTCACAGGGAAACCAGAACGTTATTTCCCAACATGGAAACGAGTCTTGAAATACTTGCTGAGTTTTGTGATCACGTTGCCCTTCTTGGGATTGGCAGTTGGTGCAATGATTCTGTCGCTAAATTTCAATGGTTATGTTAAAGACAAACACAGTCCTATTTATTTTGCAGAATTAGCGAAGTTTGCTGAACCGGGCAAGCTATTTGCAGCCGACAGTCCTTACTATGGCTGGATGGTACCAACAATATCACATTCCATCGTCATTAACATCTTGAATCGAGTTTATCGACTAGTCACTACATTTTGCACCGATTTTGAAAATCATAGGACTGAGCAGCGATGGAACAGCTCATTAATAATCAAGAGGGTTCTGTTTGAACTTTTTGATTGCTATCTTCCACTTTTCTACATCGCATACTATCAACTGAATATCATCTCATTGCGGAGAGAATTGGTTGGTCTATTTTGGGGTGATGAAATTCGTCGTCTCGTCACGGAAAGCGTCCTTCCTTACGTAACAGAAAAATTCAAACATTATAGAATCAGGGATCATGTGAAAGAAATCAAAGAGAAGACAGGAGAACGACCCACAAGCTTACAGGTTGTCGAAGATGTCCTTCTTGAAGAATACGAGCAATTTGATGACTATCTGGAAATGGTTGTCCAGTTTGGTTATGTGACCTTATTTGCATCAGCATTTCCATTGTGCTCGGCCATTACAATAGGATTCTTATTCATTGAAGCAAGATCTGACATGTTCAAATTATTGTTCTTGTGCAGAAGACCAATCGTTCGAAGGGCAAACAGCATTGGTGTATGGTTCAAAGTCCTCACAGTGATGATGGTATTGTCAATGGCAACTAACTGCTTTCTGATTGGCTTTTCGAGCGAGCAACTGGCTACATGGGTACCAGATATGTATTACCTTGATGACACAGGAGATCAATGGATAAAACCTGGCTATGGAAGGTATGTTGTTGGAATTGTATTTGGTGCAGAACACTTCCTGATTCTGTGTGTTGTCCTGGCACATTTTATGATACGAGATGTCCCAAAACATGTCCAGATTGAACTTGAAAAGAGAGAATATGAAAAGAAAGTTGCGTTGGACAAATTACATCGCCATAACAGAGGGGACGTTTCTGAAACAACTGCATAA

Transcript

evm.model.ptg000024l.268

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NW15	Anoctamin-10 OS=Homo sapiens OX=9606 GN=ANO10 PE=1 SV=2
Q8BH79	Anoctamin-10 OS=Mus musculus OX=10090 GN=Ano10 PE=1 SV=1
Q14AT5	Anoctamin-7 OS=Mus musculus OX=10090 GN=Ano7 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005464 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04547 all species →	Anoctamin	Calcium-activated chloride channel	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007632 all species →	Family	Anoctamin	Interproscan
IPR049452 all species →	Domain	Anoctamin, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12308 all species →	ANOCTAMIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005254 all species →	Molecular Function	chloride channel activity	Interproscan
GO:1902476 all species →	Biological Process	chloride transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19327	ANO10, TMEM16K; anoctamin-10	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.