Gene detail

Detailed information of evm.model.ptg000024l.767 in Aurelia coerulea

Genomic Location: chr16:2182445...2202590
NR annotation: CAH3035644.1, unnamed protein product [Porites lobata]
Species abbreviation ACOER · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q61124	Battenin OS=Mus musculus OX=10090 GN=Cln3 PE=1 SV=2
Q29611	Battenin OS=Canis lupus familiaris OX=9615 GN=CLN3 PE=3 SV=1
Q13286	Battenin OS=Homo sapiens OX=9606 GN=CLN3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004562 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02487 all species →	CLN3	CLN3 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003492 all species →	Family	Batten's disease protein Cln3	Interproscan
IPR018460 all species →	Family	Batten's disease protein Cln3, subgroup	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10981 all species →	BATTENIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0005773 all species →	Cellular Component	vacuole	Interproscan
GO:0007040 all species →	Biological Process	lysosome organization	Interproscan
GO:0051453 all species →	Biological Process	regulation of intracellular pH	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12389	BTS, CLN3; battenin	-	Lysosome	ko04142	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.