Detailed information of evm.model.ptg000031l.511 in Aurelia coerulea

Genomic Location: chr11:957370...987334
NR annotation: XP_047133534.1, uncharacterized protein LOC100204258 isoform X2 [Hydra vulgaris]
Species Aurelia coerulea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7Z333Probable helicase senataxin OS=Homo sapiens OX=9606 GN=SETX PE=1 SV=4
A2AKX3Probable helicase senataxin OS=Mus musculus OX=10090 GN=Setx PE=1 SV=1
Q92355Helicase sen1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sen1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002499 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13086
all species →		AAA_11AAA domainDomainInterproscan
PF13087
all species →		AAA_12AAA domainDomainInterproscan
PF12726
all species →		SEN1_NSEN1 N terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047187
all species →		DomainUpf1-like, C-terminal helicase domainInterproscan
IPR041677
all species →		DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR045055
all species →		FamilyDNA2/NAM7-like helicaseInterproscan
IPR041679
all species →		DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR024481
all species →		DomainHelicase Sen1, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887
all species →		DNA2/NAM7 HELICASE FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004386
all species →		Molecular Functionhelicase activityInterproscan
GO:0001147
all species →		Molecular Functiontranscription termination site sequence-specific DNA bindingInterproscan
GO:0006369
all species →		Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0016604
all species →		Cellular Componentnuclear bodyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.ptg000031l.511.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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