Gene detail

Detailed information of scaffold121.g32.t1 in Morbakka virulenta

Genomic Location: scaffold121:203696...228198
NR annotation: QVL56788.1, MAG: peptide ABC transporter substrate-binding protein [Simkaniaceae bacterium]
Species Morbakka virulenta · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold121.g32.t1

ATGAGTATGAAACCTCTGGATCGACCTCCAGATAAAGGGCAAGGTGCTAGGCGGCAATTAATTCACGATTTGCAGACGTTTTTATGGCGGTTTGAACAAGGCGGTTACTCAAGAGAAACCATGCACGATGTTTTGAAAAAGTTAAAGCGAGTTATTGAAGAGCATGGGCAGGAAGTTGGGGGAGAGCTTGAAGGGCATTTAAAAAAAATGGTTCGAGATTGTCAGTCTTATGCAGAAGTGACTCTTTTGGATTCAAGTGCCGCTCTTGTTACATTAGCTAAACAGGCTGATTTATTGGATGAGAAGGGGAAAGTGATCAAAGTTCAAAGAGCTCTAATTCCTGATGCTTTGGGCAGTATTTTAGGGAGTTTGATTGGATCTGGCTCTTTGGCGATTCACTTGGAATCGGCGGTTGGCATTAAAGCTGAGGGGAAGACTGGTTGGGTAGCTATTTGCGTCGCTTTTTGCTTTCTAGGGAGTCTCTTTTTTTATCCCGTTGTGGAGACGATTCCTCACTTTGCAGCGGCTTCCGTTCTCATTGTTTTAGGATTTTTTATGTTCCGAGAACTCCTCCATATTCCCTGGAAACAAACAACAGAGGTGATTCCAGCTCTTATTACAGCGCTTGTCATGCCGCTGACCATGAGTATTTTTAATGGATTTGCATTTGGTTTTATCGCCTATTCTTTTTTAAAATTGCTTATTGCGATGCTTTGGTCTGTCGGCAAGGACAGCACTGTTTTAGTTTGTTTAGCTCAAAAAGCTTTTTTCGGACATATTCCCTTTCCACTTCTTCATGTGGATACGGGATTTAAAATTCCGGAGATGATTCGTTACCGCGATGAGCTTGCATTGAAGTGGGGGCTTAAGATGATCTATGGGCAAAATGAAAAAGCTCTTAAAGAAAAACAAACCTTTCCCGATGGGAAGGTTGGGTGTCTCGCTTGCTGTCAGGCGCTCAAGACAGAAACACTTAAACGTCTCGTCGATGGATCATGGCCTCGCTATAAGCTGAATCTTGAAACGGGAAAGTACGAAATCGATTCAAATCGGGAGCCTTATCAGGGGTTGATTTTAGGAATTCGAGCCGATGAGGAAGGAAGTCGTTCAAAGGAAAGGGTTTTTTCTCCTCGTGATACAAAAAGCGATTGGGTCATAAACGATCAGCCTCCGGAGTTTTGTGGACAGTTCAACACAGATTTTCCTTCCGGAACGCACGTTCGTGTTCATCCTTTGTTAGATTGGACCGAAGCTGACATCTGGCGTTATATCGATAAGGAAAAGATTCCTATTTTGAACCTTTACTTTGATCGCGGGGAACATAAGCGTTATCGGTCACTTGGATGTGCTCCTTGTACTCATCCAATTTCTTCTTCAGCTTGTAATGTAAAAGAAGTGATCGATGAACTTGAGAAAGGACAACTCAAAAATATTGCAGAGCGGTCTGGGCGTGCTCAGGATCGCGAGGCTGATAGCGGTGCACTGCCTGATGAAAAGCTTAAGCGGATCAGAAAATATTGCGAAGCCAATAACAAGCCTTTTGAATATGCTTTTTTACTCGATGTATTTAAGGAGGAACAGTCTCAAGGTATTACGATCGATGCTGCTCGCTGTTTTTTTCAAACAGCAAAGCGCCGCTATCTTCTTTTAGATGCTCCCGGGCATATTGAGTTCATCCAAAATATGGTGACGGGGGCTTCACACGCAGATGGAGCACTTCTTGTGATTGATGCTAAGGAGGGGATCCGAGAAAACACTAAGCGGCATGGTTACTTTCTTTCATTGCTGGGGATTAGACAGCTTATCGTTTTAATCAATAAAATGGACCTTGTCGGATATAAAGAAAAGGTGTTTGCAGAGCTTCAATCAACCTACAGGGAATTTTTAAGTGGGTTAGGATTCCCCCCTAATTTTTTCATTCCTGTAAGTGGATTTATTGGAGATAATATTACGGAGTACTCGAAACAAATGTCTTGGTATAAAGGCCCGACCCTTTTAAAAGCAATCGACAGACTAAAAGGGATTTTGCCATTAGAAGAAGCTCCGTGTCGTTTTCCTATTCAGGCCATTTATAAATTTAATTGGGCGGGGGACGATCACCGTGTGATTGCCGGGCGGCTTGAGACAGGAAAAATCTGTGTTGGAGATATGATGACTTTTTATCCCTCAAAAAGAAAAAGCCGAATCCAAACAATTGAAGGAGCCGGTACCGATTCGGTTTCGGCAGGGATGTCAATTGGGTTAACCTTAGAAGATCCTCTTTATTTGACTCGAGGAGAAGTAGGAGCAATCGAGAAAGCTCCATCTGTTACTGAATCCTTGGCAGTTCGTCTTTTTTGGCTTCATGAGGAACCTTTAGAAAAGGGGCAGCAGGTTGTTTTAAAGCTTGGAACAAAAAGGGTTCAGGCTAAAGTCAGAGATATTTTTAAAGTTGTGAATTCAGCGACTTTAAAAGAAAAATCTTCTTCAAGTATCAGACGGCATGAAGTAGGGGAGGTTGCTCTTGATCTATCTGAGCTTATTGCCTGTGATGCGGGGGGTGAAATTGTAGAGACCTCACGTTTTGTTTTGGTTAGAAATTATCGACTTGTAGGAGGGGGAGTCGTTCAGAAAATTTTACAGCCAAAACCTAAAATTTTTTTTCAATCCTTATCGAGCATATCTTGTGAAGAAAGAGCGCACCCCTCTAAAGTGATCTTTTTTTATGGAGAAGAAAAAAAAGGGGTTACGGCTGCTGCTCAAAAGCTAGAAAAAGCGCTGTTTCAGAAGGGAGCTTTTGTGTATGCTTTGTCTTATGAACCGAAGATATGCGAGATGCTTCCAATTTTCCTCGATGCGGGATTGATGACTATTCTTATCGGAGATAAGTCGGGGTGGGAGGAGATTTCTTCGGAGGCAACTGATGTTTGCTTTGATTTTACAGCCCCAAATGTTGTCTTAGATCACATTGAAAAGGTTGTTTTTTTGGAAAAACCTTTAGTGGTCGGAACGACAGGCTGGGAAAAAGAAATGCCCTTAGCAAGGCTCCTTGCTAAAAAAAGTCAGCGGGCGGTTCTTGCTGCACCTAACTTCTCCATTGGGGTTTATCTTTTTCGGATGATCTTAAGAGAGGCAGTGAGATCATTAGAGTATTTCGAATACTATAAGGCTTGTGGAATGGAAGTTCATCATGAGGAGAAGAAGGACAGCCCTTCAGGAACTGCCAAGCAACTCGCTCATGGACTTAGAGATCTTTCTTTTTCTTCGCTTCGATCCGGGTATCATCCTGGCACCCACCAGATACTTTTTGACTCGCCCGAAGATACCATTGAACTGATCCACCGAGCTCGAAATCGAGAGGGGTTTGCACGTGGTGCACTTGAAGCTGAAATTAGCCGACGTAAAGCACAGTTTTTAGAAAAAAATCCTGATGCAAAGATCATCAGTTTAGGAATAGGGGATACGATCCTTCCTCTTGCCCCTACCATTACCTCAGCTTTAAAAAAAACAGCTGAAGAATTGGGGACGCTTGATGGATACTCTGGTTATGGCCAAGATCAGGGGCTCTATGTTTTAAGAAAAAAAATCGCTTGCCATGTTTATCAAGATCAAGTCACACCCGATGAAGTTTTTATTTCAGATGGAGCAAAATGCGACATCGGGCGCCTCCAAGTGCTTTTTGGTCATCAGGTGCGTGTAGGACTCCAAGATCCCACTTATCCTGTTTATTATGATGGAAGTGTTTTACAAGGTGTCAAAAAAGTATATTTTCTTCCATGCCTTCCAGAGCAACAATTTTTTCCAAAACTTAATGAGATTCCCCAAATAGATTTGCTTTATATTTGTAATCCGAATAATCCAACAGGGGCCGCTTACACCTATTCTCAATTAGAAGCGCTTATTTCATTTGCAAAGAAACATCAGGTTCTCATTCTATATGATGCTGCATATAGTGGCTATATTCAGGATTCAAGCCTTCCTCGCTCTATTTTTGATGTCAAAGACGGCAGGAAAGTTGCTATTGAGGTGAATTCCTTATCAAAAACCGCTGGTTTCTCCGGCGTTCGACTTGGTTGGACCATCGTTCCTAAAACACTTTTTTTTGATTGTGGGGGAAGTGTTTGGAAAGACTGGCATCGCCTTTCTGCTACCATCTTTAATGGGGCTTCTTACCTTTCCCAGCAAGGAGCTGTCGCTGCTTTTGAAAGTTCGAGTCAAAAAGAGCTTCAAAAAACTATTAGTTACTACATGAAAAATGCTTCTTTGCTAAAGGCCTGCTTTAGCAAACTGGGATATACAGTTTATGGAGGGAAGCAAGCGCCTTATCTTTGGATTCATACTCCAGAAAAGCAATCATGGGATGTGTTTGAATATTTTTTAAATACAAAACATCTTCTTGTAACACCTGGATCTGGTTATGGTCCCTCTGGAGAGCATTTCTTTCGTGTGAGCGCTTTTACATATCATGATTATGTGAACGAGGATACTGGTTTCATAGTGAATATGAAAGACAAATTACGAGTTGGGATTTTATTTGGCGGGCGGTCAGCGGAGCATGAAGTTTCTCTCAAGTCAGCACGTGCGATCATCGAGAATATGGATCGCAAGCGATATAATATTTTTCCAATTGGAATTGACAAGAAGGGCAGCTGGCACTTTTTAAAAGTGGAGCCTTTTCTAGCTTCTCTAGAACAAAATCGTCTGCCAACCTTCAAAAAAGACGATCCCTATTTTCCTGTCATTACACCAAAAATTTCAGCGCAAGATTTTTTTTTCTCTCCATGTGTATTGAAAAATGTCTTAGATATCATCTTCCCAGTTTTACATGGTCCTTATGGAGAGGATGGGACAATCCAAGGACTTGCTAAACTTACTAATCTTCCTTTTATAGGAACTGACGTGCTTGGTTCGGCTATTTGCATGGATAAAGGCCTCATGAAAATGATTCTCCGAGGAGCAGGGCTTCCGACTTCTCGATTTCAGACATATCAACAGACTGACCTTATCGATGCCGAAGTAGTTATAAGAGCTCTTGGGCTTCCTCTTTTTGTCAAACCTGCTAATGCTGGATCTTCTCTAGGAATTAATAAAGTCCATCGAAGGGACGATTTTTTTTATGCTATTGAGGAAGCTTTTAAGTATGACGAAAGAATTATTCTTGAGGAGTACATTGAGGGAAGGGAACTTGAATGTTCTGTGTTGGGCAACCTAGATCCGATCGTTTCGTTGCCAGGAGAAATCCTTACTCAACATGAATTTTACACCTACGAAGCCAAGTATTTAGACGAAAATGGGGCCTTTTTTGAACTTCCGGCAAAGCTTCCGGCGAAGACTATCCAAGAACTGCAAGCTCTTGCAATCAAAGCCTTCAAGATTTTGCAGTGTGAGGGAATGGCTCGAGTAGATTTTTTCCTCCGCTATAGAGATGGAAAGCTTTTTCTTAATGAACTCAATACGATTCCTGGTTTTACAACGATTAGCCTTTACCCTAAGCTATGGGAAATCAGCGGTATTTCTTATTCAGAGCTCGTCGATAGACTTATCATACTGGAAGTTAAAATTTTGGTGAACTCCAAAAAAGAATGGGATATCATTCAGGAAAATCTCTCTCCTCTAAATAAAGAGGTGATACAGGTCATTCAATCCGGAAGATTTGCGAAGTCGATTTTGGAGACGAAGATTCTTCCTCTTGATCACAAGATGAATTTGATTCAGGAAATGTTGATTCGGTTACTGAAACGTTTTCCTGATGATTTAGATCAGCGCATTTTTAACGACCTTTCCTATGCTCGGGTTAATACAACCGACGAATTTAGACATCAGCGAACTTATTTGCATCTTACCCGCATCATTGTTTCTCTTTATCTAATACGAGAAGGAGTAGATCGGGATCTAAAAGCATTCCCCGAAAAGCGGCATATGATGATTCGGTATTTACGCACTCAGCTGAAGTTTCCTTTTGGGAAAAAACCTGTTTTAGGCCTTGCGGTTAGTGTTAACCTCTTTCATAAATACGAATCTTTTGAAGAGAAGCATGTCCTTCTTTCCGTTCAAAAATTTGTTTCCGATGTTCGAGTAGTACCGGGCTCTCTTCTACGTTATCAAATTCCCCAGAGCCCCATTTTAAGCCTTTATGTGGAACTTGAAAAAGAGGACGGCTCTTTCTTTTCTTCCGAAGAAGTTCAATTTTTAAAGGAGAGCTTGAAAGGTGAACTCAGCAAGCGAATTGAACACTTAGTCCCTTCGCTTTTCATGGTTCGGAACGAAGAAGAAACAATGAAGAATATCTTAATCCTGAGTGAAGAACTAAAGGACCCAAACGACCTTCCGCAAATGATGGCGTCATTTGATCAACATTCTCAGAATGATTTGATTTTTACTGTTGTTCTTTTGCGTGTTAAAAAAAAGGAGAGTCGTCCGATTCAGCAGCAGCTGAAAAATATTGACAAGAGAATCCGATTTATCTCTGATCGTATACAGATTGTGAGTTATTTAGAGAAAGATTATCCGATAGAAGCTAATGTTTTTCGCCTTCAAATTAGCAAACTCCCCATTTTTCTTAGAATGGACTTTTCGGTAAACCTTTACCTTGCGCGCCAAGAAGTGGTTACTTTTCTGAACAATGCTTTAGGCGAAATTCGAGATTATAATGGAGGGATGATCCTCAAGCAAGGAGAGTTGCTTTCTCAATTTAAGCGTCTTTTCAAGGATATTTCCAAGAAGAACCAAGAGCTTCTTGAAAATTTTTTCTACTCTTTGAATCCAATTGAGTCTCAAGCAACGATTCCTTTGAAATCTCTTAGTCTGTTTTTTGAACTCTTTTTAAAGCAGGTCGAGAGGGACTTTTCAAACGACTACAACTCTCGGGTTATATTCGAGAAAGATGAGGATACAATTTTTTCCGTGATATGTGCAGATGATTCGAGTTTTCGTAACGAAATTGAGGAAAATCTCAATCGGATACATATTTATGAACGCTCTCTTGTTTCATCTAAGCTTTCATTTGAAGGTGCACATTATTTAAGTTATCTCTACTCACAAGAGGATGTGGAAAAACAGAATCAGTTTAAAGAATCAATTCTTAAAGGAGCTAAAAGTTGGGAGCAAGAAAAAGAAAAACTTCAAATTTTGCGCTTGAGCTTTCATGATTTTACTTCCTTAGATCCACGCATCGGAGGGGATCAAGAATCTAGCTTTATTGTTAAAATGCTTTTCGATGGATTAATTCGCCTAGATGAGAAAGGAGTTTTAAGATGTTCGATTGCTGAATCGTATAAGGTTTCAAAAGACAAAAAACACTATATTTTTAAACTGCGCGAAACTTTTTGGTCAAATGACTCTCCTGTTATTGCTTATGATTTCGAATATGCATGGAAAAAAATTCTCTCTCCCGACTTTTCAACACCTTTTGCCTACGTTTTTTATCCCATCAAAAACGCAAAGCTTGCAAGAGAAGGCAAAGTTTCGCTTGACCAAGTGGGTGTTAAAGCTATAGATGATAAAACTCTCGCCGTTGATTTAGAGCATCCGGCGCCCTATTTTATAGAACTTACTTCCTGTACCCTTTACTCTCCAGTGAATCACCTTGTAGATAAAGCCCACCCCAATTGGGCAGCCCAAAAGAATGAAGAATTCATCTGCAATGGGCCATTTAAACTTAAGCAACCTCGTCCCGCTTACACCTATGAACTTGAAAAGAATCCGAACTACTGGAATAACGATTGCATTAGACTTGACCAAGTCATTATCAATCGTGCTCATGGGAAAGCAGCACTTGAAATGTTTAATAAGAAGCAAATCAATTTCTTAGGGTTCCCTATCTGTCCGATTGAAGATGTGGCTTTAAAAGAGGTAAGTGAGCAGGGGATTTCTTATCCAGCTCCGAAAGTGTTTTGGTTCTCTTTAAACGTGAATCATTTCCCATTTAATCATCTAAAAATGCGTAAAGCGTTTGGCCATGCTCTCAACCGTAAACGGATCAAGAAGATTTTCCCCTACCATAAAAAATTTGCCTTTACTCCGCTTCCGCTTGTTTTTACTTACCACCGGGATGCAGACTTTCTCATTCGGGAAGATGAGGAGATAGCAAAGGCTATTTTTGATGAAGCCTTAGAAGAAATAGGAATGAAAAAAGACGAATTCCCTATCGTTTATATTTCTGTTTCGACCACAGGTATTAACAGAAAAATGGCAGAAGTTATTAAAGAGGACTGGGAAAGAGTTTTTAAAATCCGCTGTGAAGTCGAAGCCTATGAGTGGCATGATCTTTTTCGTAAGCTGACAGAAGGAAATTTTCAAGTTGCTTCCGTTCATTGGACTTCGTGGATTAATGACCCGATTTATACATTAAATGCTTTTAGATATCGCCATGAAATGGTGAATTTCCCAAGTTGGGAAAATGCAGACTACCAAAAGCTTCTTGATCTTTCTGATCAAGAAGTGGATCCTCGAAAAAGGGCTGCTTATCTCTCTAAGGCAGAAGAAATTCTTATTCGAGAGGTTGTTGTGTTTCCGATCTTTTACGAAATGCACTGGTATATCAAAAGGACAAATCGATCCGACCTTAATCTGGTTTTTCCAAAAGCTCTTTCGAATGGAAATTTCGATCTTTCTCAGGTTTACTTTAAAAAAAAATCCTCTTAA

Transcript

scaffold121.g32.t1

GCTTATCGAGAGCCAACTCCATTTGATCAGCCTTTTCCGGGGGCAATAAATACCTTAAAACGTGAATTGTCTAAGAATTTAGAGGTTTTTGTTTTTCGATTTGGGCATGAAAATCAAACCAGGGCATCGATGAGTCGGTTAATGCGGCTCAATGAAGCTCTCTTAATGCAGCGTGCACGAGAGGTTGGTGGAAAAATTTTATTTCATATGGAAAAACTTATGGGTGCATGTGGAGACTTTGCTAATGGCCAAGGAACGCTCGAACAAGTGAACGAACATATTGAGAGACTAAGAGATAGCTTAAGGAGTTAGAGATGAGTATGAAACCTCTGGATCGACCTCCAGATAAAGGGCAAGGTGCTAGGCGGCAATTAATTCACGATTTGCAGACGTTTTTATGGCGGTTTGAACAAGGCGGTTACTCAAGAGAAACCATGCACGATGTTTTGAAAAAGTTAAAGCGAGTTATTGAAGAGCATGGGCAGGAAGTTGGGGGAGAGCTTGAAGGGCATTTAAAAAAAATGGTTCGAGATTGTCAGTCTTATGCAGAAGTGACTCTTTTGGATTCAAGTGCCGCTCTTGTTACATTAGCTAAACAGGCTGATTTATTGGATGAGAAGGGGAAAGTGATCAAAGTTCAAAGAGCTCTAATTCCTGATGCTTTGGGCAGTATTTTAGGGAGTTTGATTGGATCTGGCTCTTTGGCGATTCACTTGGAATCGGCGGTTGGCATTAAAGCTGAGGGGAAGACTGGTTGGGTAGCTATTTGCGTCGCTTTTTGCTTTCTAGGGAGTCTCTTTTTTTATCCCGTTGTGGAGACGATTCCTCACTTTGCAGCGGCTTCCGTTCTCATTGTTTTAGGATTTTTTATGTTCCGAGAACTCCTCCATATTCCCTGGAAACAAACAACAGAGGTGATTCCAGCTCTTATTACAGCGCTTGTCATGCCGCTGACCATGAGTATTTTTAATGGATTTGCATTTGGTTTTATCGCCTATTCTTTTTTAAAATTGCTTATTGCGATGCTTTGGTCTGTCGGCAAGGACAGCACTGTTTTAGTTTGTTTAGCTCAAAAAGCTTTTTTCGGACATATTCCCTTTCCACTTCTTCATGTGGATACGGGATTTAAAATTCCGGAGATGATTCGTTACCGCGATGAGCTTGCATTGAAGTGGGGGCTTAAGATGATCTATGGGCAAAATGAAAAAGCTCTTAAAGAAAAACAAACCTTTCCCGATGGGAAGGTTGGGTGTCTCGCTTGCTGTCAGGCGCTCAAGACAGAAACACTTAAACGTCTCGTCGATGGATCATGGCCTCGCTATAAGCTGAATCTTGAAACGGGAAAGTACGAAATCGATTCAAATCGGGAGCCTTATCAGGGGTTGATTTTAGGAATTCGAGCCGATGAGGAAGGAAGTCGTTCAAAGGAAAGGGTTTTTTCTCCTCGTGATACAAAAAGCGATTGGGTCATAAACGATCAGCCTCCGGAGTTTTGTGGACAGTTCAACACAGATTTTCCTTCCGGAACGCACGTTCGTGTTCATCCTTTGTTAGATTGGACCGAAGCTGACATCTGGCGTTATATCGATAAGGAAAAGATTCCTATTTTGAACCTTTACTTTGATCGCGGGGAACATAAGCGTTATCGGTCACTTGGATGTGCTCCTTGTACTCATCCAATTTCTTCTTCAGCTTGTAATGTAAAAGAAGTGATCGATGAACTTGAGAAAGGACAACTCAAAAATATTGCAGAGCGGTCTGGGCGTGCTCAGGATCGCGAGGCTGATAGCGGTGCACTGCCTGATGAAAAGCTTAAGCGGATCAGAAAATATTGCGAAGCCAATAACAAGCCTTTTGAATATGCTTTTTTACTCGATGTATTTAAGGAGGAACAGTCTCAAGGTATTACGATCGATGCTGCTCGCTGTTTTTTTCAAACAGCAAAGCGCCGCTATCTTCTTTTAGATGCTCCCGGGCATATTGAGTTCATCCAAAATATGGTGACGGGGGCTTCACACGCAGATGGAGCACTTCTTGTGATTGATGCTAAGGAGGGGATCCGAGAAAACACTAAGCGGCATGGTTACTTTCTTTCATTGCTGGGGATTAGACAGCTTATCGTTTTAATCAATAAAATGGACCTTGTCGGATATAAAGAAAAGGTGTTTGCAGAGCTTCAATCAACCTACAGGGAATTTTTAAGTGGGTTAGGATTCCCCCCTAATTTTTTCATTCCTGTAAGTGGATTTATTGGAGATAATATTACGGAGTACTCGAAACAAATGTCTTGGTATAAAGGCCCGACCCTTTTAAAAGCAATCGACAGACTAAAAGGGATTTTGCCATTAGAAGAAGCTCCGTGTCGTTTTCCTATTCAGGCCATTTATAAATTTAATTGGGCGGGGGACGATCACCGTGTGATTGCCGGGCGGCTTGAGACAGGAAAAATCTGTGTTGGAGATATGATGACTTTTTATCCCTCAAAAAGAAAAAGCCGAATCCAAACAATTGAAGGAGCCGGTACCGATTCGGTTTCGGCAGGGATGTCAATTGGGTTAACCTTAGAAGATCCTCTTTATTTGACTCGAGGAGAAGTAGGAGCAATCGAGAAAGCTCCATCTGTTACTGAATCCTTGGCAGTTCGTCTTTTTTGGCTTCATGAGGAACCTTTAGAAAAGGGGCAGCAGGTTGTTTTAAAGCTTGGAACAAAAAGGGTTCAGGCTAAAGTCAGAGATATTTTTAAAGTTGTGAATTCAGCGACTTTAAAAGAAAAATCTTCTTCAAGTATCAGACGGCATGAAGTAGGGGAGGTTGCTCTTGATCTATCTGAGCTTATTGCCTGTGATGCGGGGGGTGAAATTGTAGAGACCTCACGTTTTGTTTTGGTTAGAAATTATCGACTTGTAGGAGGGGGAGTCGTTCAGAAAATTTTACAGCCAAAACCTAAAATTTTTTTTCAATCCTTATCGAGCATATCTTGTGAAGAAAGAGCGCACCCCTCTAAAGTGATCTTTTTTTATGGAGAAGAAAAAAAAGGGGTTACGGCTGCTGCTCAAAAGCTAGAAAAAGCGCTGTTTCAGAAGGGAGCTTTTGTGTATGCTTTGTCTTATGAACCGAAGATATGCGAGATGCTTCCAATTTTCCTCGATGCGGGATTGATGACTATTCTTATCGGAGATAAGTCGGGGTGGGAGGAGATTTCTTCGGAGGCAACTGATGTTTGCTTTGATTTTACAGCCCCAAATGTTGTCTTAGATCACATTGAAAAGGTTGTTTTTTTGGAAAAACCTTTAGTGGTCGGAACGACAGGCTGGGAAAAAGAAATGCCCTTAGCAAGGCTCCTTGCTAAAAAAAGTCAGCGGGCGGTTCTTGCTGCACCTAACTTCTCCATTGGGGTTTATCTTTTTCGGATGATCTTAAGAGAGGCAGTGAGATCATTAGAGTATTTCGAATACTATAAGGCTTGTGGAATGGAAGTTCATCATGAGGAGAAGAAGGACAGCCCTTCAGGAACTGCCAAGCAACTCGCTCATGGACTTAGAGATCTTTCTTTTTCTTCGCTTCGATCCGGGTATCATCCTGGCACCCACCAGATACTTTTTGACTCGCCCGAAGATACCATTGAACTGATCCACCGAGCTCGAAATCGAGAGGGGTTTGCACGTGGTGCACTTGAAGCTGAAATTAGCCGACGTAAAGCACAGTTTTTAGAAAAAAATCCTGATGCAAAGATCATCAGTTTAGGAATAGGGGATACGATCCTTCCTCTTGCCCCTACCATTACCTCAGCTTTAAAAAAAACAGCTGAAGAATTGGGGACGCTTGATGGATACTCTGGTTATGGCCAAGATCAGGGGCTCTATGTTTTAAGAAAAAAAATCGCTTGCCATGTTTATCAAGATCAAGTCACACCCGATGAAGTTTTTATTTCAGATGGAGCAAAATGCGACATCGGGCGCCTCCAAGTGCTTTTTGGTCATCAGGTGCGTGTAGGACTCCAAGATCCCACTTATCCTGTTTATTATGATGGAAGTGTTTTACAAGGTGTCAAAAAAGTATATTTTCTTCCATGCCTTCCAGAGCAACAATTTTTTCCAAAACTTAATGAGATTCCCCAAATAGATTTGCTTTATATTTGTAATCCGAATAATCCAACAGGGGCCGCTTACACCTATTCTCAATTAGAAGCGCTTATTTCATTTGCAAAGAAACATCAGGTTCTCATTCTATATGATGCTGCATATAGTGGCTATATTCAGGATTCAAGCCTTCCTCGCTCTATTTTTGATGTCAAAGACGGCAGGAAAGTTGCTATTGAGGTGAATTCCTTATCAAAAACCGCTGGTTTCTCCGGCGTTCGACTTGGTTGGACCATCGTTCCTAAAACACTTTTTTTTGATTGTGGGGGAAGTGTTTGGAAAGACTGGCATCGCCTTTCTGCTACCATCTTTAATGGGGCTTCTTACCTTTCCCAGCAAGGAGCTGTCGCTGCTTTTGAAAGTTCGAGTCAAAAAGAGCTTCAAAAAACTATTAGTTACTACATGAAAAATGCTTCTTTGCTAAAGGCCTGCTTTAGCAAACTGGGATATACAGTTTATGGAGGGAAGCAAGCGCCTTATCTTTGGATTCATACTCCAGAAAAGCAATCATGGGATGTGTTTGAATATTTTTTAAATACAAAACATCTTCTTGTAACACCTGGATCTGGTTATGGTCCCTCTGGAGAGCATTTCTTTCGTGTGAGCGCTTTTACATATCATGATTATGTGAACGAGGATACTGGTTTCATAGTGAATATGAAAGACAAATTACGAGTTGGGATTTTATTTGGCGGGCGGTCAGCGGAGCATGAAGTTTCTCTCAAGTCAGCACGTGCGATCATCGAGAATATGGATCGCAAGCGATATAATATTTTTCCAATTGGAATTGACAAGAAGGGCAGCTGGCACTTTTTAAAAGTGGAGCCTTTTCTAGCTTCTCTAGAACAAAATCGTCTGCCAACCTTCAAAAAAGACGATCCCTATTTTCCTGTCATTACACCAAAAATTTCAGCGCAAGATTTTTTTTTCTCTCCATGTGTATTGAAAAATGTCTTAGATATCATCTTCCCAGTTTTACATGGTCCTTATGGAGAGGATGGGACAATCCAAGGACTTGCTAAACTTACTAATCTTCCTTTTATAGGAACTGACGTGCTTGGTTCGGCTATTTGCATGGATAAAGGCCTCATGAAAATGATTCTCCGAGGAGCAGGGCTTCCGACTTCTCGATTTCAGACATATCAACAGACTGACCTTATCGATGCCGAAGTAGTTATAAGAGCTCTTGGGCTTCCTCTTTTTGTCAAACCTGCTAATGCTGGATCTTCTCTAGGAATTAATAAAGTCCATCGAAGGGACGATTTTTTTTATGCTATTGAGGAAGCTTTTAAGTATGACGAAAGAATTATTCTTGAGGAGTACATTGAGGGAAGGGAACTTGAATGTTCTGTGTTGGGCAACCTAGATCCGATCGTTTCGTTGCCAGGAGAAATCCTTACTCAACATGAATTTTACACCTACGAAGCCAAGTATTTAGACGAAAATGGGGCCTTTTTTGAACTTCCGGCAAAGCTTCCGGCGAAGACTATCCAAGAACTGCAAGCTCTTGCAATCAAAGCCTTCAAGATTTTGCAGTGTGAGGGAATGGCTCGAGTAGATTTTTTCCTCCGCTATAGAGATGGAAAGCTTTTTCTTAATGAACTCAATACGATTCCTGGTTTTACAACGATTAGCCTTTACCCTAAGCTATGGGAAATCAGCGGTATTTCTTATTCAGAGCTCGTCGATAGACTTATCATACTGGAAGTTAAAATTTTGGTGAACTCCAAAAAAGAATGGGATATCATTCAGGAAAATCTCTCTCCTCTAAATAAAGAGGTGATACAGGTCATTCAATCCGGAAGATTTGCGAAGTCGATTTTGGAGACGAAGATTCTTCCTCTTGATCACAAGATGAATTTGATTCAGGAAATGTTGATTCGGTTACTGAAACGTTTTCCTGATGATTTAGATCAGCGCATTTTTAACGACCTTTCCTATGCTCGGGTTAATACAACCGACGAATTTAGACATCAGCGAACTTATTTGCATCTTACCCGCATCATTGTTTCTCTTTATCTAATACGAGAAGGAGTAGATCGGGATCTAAAAGCATTCCCCGAAAAGCGGCATATGATGATTCGGTATTTACGCACTCAGCTGAAGTTTCCTTTTGGGAAAAAACCTGTTTTAGGCCTTGCGGTTAGTGTTAACCTCTTTCATAAATACGAATCTTTTGAAGAGAAGCATGTCCTTCTTTCCGTTCAAAAATTTGTTTCCGATGTTCGAGTAGTACCGGGCTCTCTTCTACGTTATCAAATTCCCCAGAGCCCCATTTTAAGCCTTTATGTGGAACTTGAAAAAGAGGACGGCTCTTTCTTTTCTTCCGAAGAAGTTCAATTTTTAAAGGAGAGCTTGAAAGGTGAACTCAGCAAGCGAATTGAACACTTAGTCCCTTCGCTTTTCATGGTTCGGAACGAAGAAGAAACAATGAAGAATATCTTAATCCTGAGTGAAGAACTAAAGGACCCAAACGACCTTCCGCAAATGATGGCGTCATTTGATCAACATTCTCAGAATGATTTGATTTTTACTGTTGTTCTTTTGCGTGTTAAAAAAAAGGAGAGTCGTCCGATTCAGCAGCAGCTGAAAAATATTGACAAGAGAATCCGATTTATCTCTGATCGTATACAGATTGTGAGTTATTTAGAGAAAGATTATCCGATAGAAGCTAATGTTTTTCGCCTTCAAATTAGCAAACTCCCCATTTTTCTTAGAATGGACTTTTCGGTAAACCTTTACCTTGCGCGCCAAGAAGTGGTTACTTTTCTGAACAATGCTTTAGGCGAAATTCGAGATTATAATGGAGGGATGATCCTCAAGCAAGGAGAGTTGCTTTCTCAATTTAAGCGTCTTTTCAAGGATATTTCCAAGAAGAACCAAGAGCTTCTTGAAAATTTTTTCTACTCTTTGAATCCAATTGAGTCTCAAGCAACGATTCCTTTGAAATCTCTTAGTCTGTTTTTTGAACTCTTTTTAAAGCAGGTCGAGAGGGACTTTTCAAACGACTACAACTCTCGGGTTATATTCGAGAAAGATGAGGATACAATTTTTTCCGTGATATGTGCAGATGATTCGAGTTTTCGTAACGAAATTGAGGAAAATCTCAATCGGATACATATTTATGAACGCTCTCTTGTTTCATCTAAGCTTTCATTTGAAGGTGCACATTATTTAAGTTATCTCTACTCACAAGAGGATGTGGAAAAACAGAATCAGTTTAAAGAATCAATTCTTAAAGGAGCTAAAAGTTGGGAGCAAGAAAAAGAAAAACTTCAAATTTTGCGCTTGAGCTTTCATGATTTTACTTCCTTAGATCCACGCATCGGAGGGGATCAAGAATCTAGCTTTATTGTTAAAATGCTTTTCGATGGATTAATTCGCCTAGATGAGAAAGGAGTTTTAAGATGTTCGATTGCTGAATCGTATAAGGTTTCAAAAGACAAAAAACACTATATTTTTAAACTGCGCGAAACTTTTTGGTCAAATGACTCTCCTGTTATTGCTTATGATTTCGAATATGCATGGAAAAAAATTCTCTCTCCCGACTTTTCAACACCTTTTGCCTACGTTTTTTATCCCATCAAAAACGCAAAGCTTGCAAGAGAAGGCAAAGTTTCGCTTGACCAAGTGGGTGTTAAAGCTATAGATGATAAAACTCTCGCCGTTGATTTAGAGCATCCGGCGCCCTATTTTATAGAACTTACTTCCTGTACCCTTTACTCTCCAGTGAATCACCTTGTAGATAAAGCCCACCCCAATTGGGCAGCCCAAAAGAATGAAGAATTCATCTGCAATGGGCCATTTAAACTTAAGCAACCTCGTCCCGCTTACACCTATGAACTTGAAAAGAATCCGAACTACTGGAATAACGATTGCATTAGACTTGACCAAGTCATTATCAATCGTGCTCATGGGAAAGCAGCACTTGAAATGTTTAATAAGAAGCAAATCAATTTCTTAGGGTTCCCTATCTGTCCGATTGAAGATGTGGCTTTAAAAGAGGTAAGTGAGCAGGGGATTTCTTATCCAGCTCCGAAAGTGTTTTGGTTCTCTTTAAACGTGAATCATTTCCCATTTAATCATCTAAAAATGCGTAAAGCGTTTGGCCATGCTCTCAACCGTAAACGGATCAAGAAGATTTTCCCCTACCATAAAAAATTTGCCTTTACTCCGCTTCCGCTTGTTTTTACTTACCACCGGGATGCAGACTTTCTCATTCGGGAAGATGAGGAGATAGCAAAGGCTATTTTTGATGAAGCCTTAGAAGAAATAGGAATGAAAAAAGACGAATTCCCTATCGTTTATATTTCTGTTTCGACCACAGGTATTAACAGAAAAATGGCAGAAGTTATTAAAGAGGACTGGGAAAGAGTTTTTAAAATCCGCTGTGAAGTCGAAGCCTATGAGTGGCATGATCTTTTTCGTAAGCTGACAGAAGGAAATTTTCAAGTTGCTTCCGTTCATTGGACTTCGTGGATTAATGACCCGATTTATACATTAAATGCTTTTAGATATCGCCATGAAATGGTGAATTTCCCAAGTTGGGAAAATGCAGACTACCAAAAGCTTCTTGATCTTTCTGATCAAGAAGTGGATCCTCGAAAAAGGGCTGCTTATCTCTCTAAGGCAGAAGAAATTCTTATTCGAGAGGTTGTTGTGTTTCCGATCTTTTACGAAATGCACTGGTATATCAAAAGGACAAATCGATCCGACCTTAATCTGGTTTTTCCAAAAGCTCTTTCGAATGGAAATTTCGATCTTTCTCAGGTTTACTTTAAAAAAAAATCCTCTTAATCCTCGTAAACATTTGTTTTTTAATCCTTAGCTGGTATCATTTGCTCGTGTATTTTATAGAATACATGTTAAGACTTAGC

Protein

scaffold121.g32.t1

MSMKPLDRPPDKGQGARRQLIHDLQTFLWRFEQGGYSRETMHDVLKKLKRVIEEHGQEVGGELEGHLKKMVRDCQSYAEVTLLDSSAALVTLAKQADLLDEKGKVIKVQRALIPDALGSILGSLIGSGSLAIHLESAVGIKAEGKTGWVAICVAFCFLGSLFFYPVVETIPHFAAASVLIVLGFFMFRELLHIPWKQTTEVIPALITALVMPLTMSIFNGFAFGFIAYSFLKLLIAMLWSVGKDSTVLVCLAQKAFFGHIPFPLLHVDTGFKIPEMIRYRDELALKWGLKMIYGQNEKALKEKQTFPDGKVGCLACCQALKTETLKRLVDGSWPRYKLNLETGKYEIDSNREPYQGLILGIRADEEGSRSKERVFSPRDTKSDWVINDQPPEFCGQFNTDFPSGTHVRVHPLLDWTEADIWRYIDKEKIPILNLYFDRGEHKRYRSLGCAPCTHPISSSACNVKEVIDELEKGQLKNIAERSGRAQDREADSGALPDEKLKRIRKYCEANNKPFEYAFLLDVFKEEQSQGITIDAARCFFQTAKRRYLLLDAPGHIEFIQNMVTGASHADGALLVIDAKEGIRENTKRHGYFLSLLGIRQLIVLINKMDLVGYKEKVFAELQSTYREFLSGLGFPPNFFIPVSGFIGDNITEYSKQMSWYKGPTLLKAIDRLKGILPLEEAPCRFPIQAIYKFNWAGDDHRVIAGRLETGKICVGDMMTFYPSKRKSRIQTIEGAGTDSVSAGMSIGLTLEDPLYLTRGEVGAIEKAPSVTESLAVRLFWLHEEPLEKGQQVVLKLGTKRVQAKVRDIFKVVNSATLKEKSSSSIRRHEVGEVALDLSELIACDAGGEIVETSRFVLVRNYRLVGGGVVQKILQPKPKIFFQSLSSISCEERAHPSKVIFFYGEEKKGVTAAAQKLEKALFQKGAFVYALSYEPKICEMLPIFLDAGLMTILIGDKSGWEEISSEATDVCFDFTAPNVVLDHIEKVVFLEKPLVVGTTGWEKEMPLARLLAKKSQRAVLAAPNFSIGVYLFRMILREAVRSLEYFEYYKACGMEVHHEEKKDSPSGTAKQLAHGLRDLSFSSLRSGYHPGTHQILFDSPEDTIELIHRARNREGFARGALEAEISRRKAQFLEKNPDAKIISLGIGDTILPLAPTITSALKKTAEELGTLDGYSGYGQDQGLYVLRKKIACHVYQDQVTPDEVFISDGAKCDIGRLQVLFGHQVRVGLQDPTYPVYYDGSVLQGVKKVYFLPCLPEQQFFPKLNEIPQIDLLYICNPNNPTGAAYTYSQLEALISFAKKHQVLILYDAAYSGYIQDSSLPRSIFDVKDGRKVAIEVNSLSKTAGFSGVRLGWTIVPKTLFFDCGGSVWKDWHRLSATIFNGASYLSQQGAVAAFESSSQKELQKTISYYMKNASLLKACFSKLGYTVYGGKQAPYLWIHTPEKQSWDVFEYFLNTKHLLVTPGSGYGPSGEHFFRVSAFTYHDYVNEDTGFIVNMKDKLRVGILFGGRSAEHEVSLKSARAIIENMDRKRYNIFPIGIDKKGSWHFLKVEPFLASLEQNRLPTFKKDDPYFPVITPKISAQDFFFSPCVLKNVLDIIFPVLHGPYGEDGTIQGLAKLTNLPFIGTDVLGSAICMDKGLMKMILRGAGLPTSRFQTYQQTDLIDAEVVIRALGLPLFVKPANAGSSLGINKVHRRDDFFYAIEEAFKYDERIILEEYIEGRELECSVLGNLDPIVSLPGEILTQHEFYTYEAKYLDENGAFFELPAKLPAKTIQELQALAIKAFKILQCEGMARVDFFLRYRDGKLFLNELNTIPGFTTISLYPKLWEISGISYSELVDRLIILEVKILVNSKKEWDIIQENLSPLNKEVIQVIQSGRFAKSILETKILPLDHKMNLIQEMLIRLLKRFPDDLDQRIFNDLSYARVNTTDEFRHQRTYLHLTRIIVSLYLIREGVDRDLKAFPEKRHMMIRYLRTQLKFPFGKKPVLGLAVSVNLFHKYESFEEKHVLLSVQKFVSDVRVVPGSLLRYQIPQSPILSLYVELEKEDGSFFSSEEVQFLKESLKGELSKRIEHLVPSLFMVRNEEETMKNILILSEELKDPNDLPQMMASFDQHSQNDLIFTVVLLRVKKKESRPIQQQLKNIDKRIRFISDRIQIVSYLEKDYPIEANVFRLQISKLPIFLRMDFSVNLYLARQEVVTFLNNALGEIRDYNGGMILKQGELLSQFKRLFKDISKKNQELLENFFYSLNPIESQATIPLKSLSLFFELFLKQVERDFSNDYNSRVIFEKDEDTIFSVICADDSSFRNEIEENLNRIHIYERSLVSSKLSFEGAHYLSYLYSQEDVEKQNQFKESILKGAKSWEQEKEKLQILRLSFHDFTSLDPRIGGDQESSFIVKMLFDGLIRLDEKGVLRCSIAESYKVSKDKKHYIFKLRETFWSNDSPVIAYDFEYAWKKILSPDFSTPFAYVFYPIKNAKLAREGKVSLDQVGVKAIDDKTLAVDLEHPAPYFIELTSCTLYSPVNHLVDKAHPNWAAQKNEEFICNGPFKLKQPRPAYTYELEKNPNYWNNDCIRLDQVIINRAHGKAALEMFNKKQINFLGFPICPIEDVALKEVSEQGISYPAPKVFWFSLNVNHFPFNHLKMRKAFGHALNRKRIKKIFPYHKKFAFTPLPLVFTYHRDADFLIREDEEIAKAIFDEALEEIGMKKDEFPIVYISVSTTGINRKMAEVIKEDWERVFKIRCEVEAYEWHDLFRKLTEGNFQVASVHWTSWINDPIYTLNAFRYRHEMVNFPSWENADYQKLLDLSDQEVDPRKRAAYLSKAEEILIREVVVFPIFYEMHWYIKRTNRSDLNLVFPKALSNGNFDLSQVYFKKKSS

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6MDE0	LL-diaminopimelate aminotransferase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=dapL PE=1 SV=2
Q93ZN9	LL-diaminopimelate aminotransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DAP PE=1 SV=1
Q10MQ2	Probable LL-diaminopimelate aminotransferase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=AGD2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0015603 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07478 all species →	Dala_Dala_lig_C	D-ala D-ala ligase C-terminus	Family	Interproscan
PF05173 all species →	DapB_C	Dihydrodipicolinate reductase, C-terminus	Domain	Interproscan
PF01113 all species →	DapB_N	Dihydrodipicolinate reductase, N-terminus	Domain	Interproscan
PF00009 all species →	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan
PF01820 all species →	Dala_Dala_lig_N	D-ala D-ala ligase N-terminus	Family	Interproscan
PF00155 all species →	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan
PF00496 all species →	SBP_bac_5	Bacterial extracellular solute-binding proteins, family 5 Middle	Domain	Interproscan
PF01507 all species →	PAPS_reduct	Phosphoadenosine phosphosulfate reductase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011095 all species →	Domain	D-alanine--D-alanine ligase, C-terminal	Interproscan
IPR019942 all species →	Family	LL-diaminopimelate aminotransferase/aminotransferase ALD1	Interproscan
IPR011761 all species →	Domain	ATP-grasp fold	Interproscan
IPR022663 all species →	Domain	Dihydrodipicolinate reductase, C-terminal	Interproscan
IPR016185 all species →	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan
IPR000291 all species →	Conserved_site	D-alanine--D-alanine ligase/VANA/B/C, conserved site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR009001 all species →	Homologous_superfamily	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Interproscan
IPR000795 all species →	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR002500 all species →	Domain	Phosphoadenosine phosphosulphate reductase	Interproscan
IPR000846 all species →	Domain	Dihydrodipicolinate reductase, N-terminal	Interproscan
IPR011127 all species →	Domain	D-alanine--D-alanine ligase, N-terminal domain	Interproscan
IPR004839 all species →	Domain	Aminotransferase, class I/classII	Interproscan
IPR000914 all species →	Domain	Solute-binding protein family 5 domain	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR005905 all species →	Family	D-alanine--D-alanine ligase	Interproscan
IPR013815 all species →	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43144 all species →	AMINOTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008716 all species →	Molecular Function	D-alanine-D-alanine ligase activity	Interproscan
GO:0008483 all species →	Molecular Function	transaminase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0008839 all species →	Molecular Function	4-hydroxy-tetrahydrodipicolinate reductase	Interproscan
GO:0009089 all species →	Biological Process	lysine biosynthetic process via diaminopimelate	Interproscan
GO:0010285 all species →	Molecular Function	L,L-diaminopimelate aminotransferase activity	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold121.g32.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Co-expression network

Genes whose expression across the transcriptome samples of Morbakka virulenta tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Morbakka virulenta, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	no expression matrix	–
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →