Gene detail

Detailed information of scaffold121.g9.t1 in Morbakka virulenta

Genomic Location: scaffold121:61556...72387
NR annotation: MCB1107008.1, hypothetical protein [Chlamydiia bacterium]
Species Morbakka virulenta · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold121.g9.t1

ATGGCCCGAGTCAAAGGTTGTAATCCGGTTTTGGATTATTGGGTTGATTCTCGCCTTAGCGGGGCTCGCTTCAATCAAATTTCAATAGGAGGTTTGATGCAAGCACTTGTCATTGGTTTAGGGAAAAGTGGTCGGGGAGCCGCCAGGTTTCTTCGGCATTTAGGTTATAAAGTTACAGGAGTGGACCGGTTGCTCGCAGGAAAAAAGCTAGAAGGGGTTTATCTTTTTTCTGAAGAAGAATCGTTGCCTCATTTTGATTTTGATATTGTGATTTTATCTCCGGGCATTCCTCAAACCCACCCACTGGCATTGAGAGCTCAAAGACAGGGAATAAAGCTCATGGGAGAAGCGGAGTTGGCTCTGCGTCACTTAAAAAATCCGTGTATTGGCATCACAGGAACAAATGGAAAAACGACATTAACCCTACTCATTGCGCATATATTGAATACTTGTGGAAAAAAAGCGCGGGCATTAGGCAATGTTGGAGAAAGTTTAGCCGGAAACTTAATCGACCTTGATCCTGAAATAATTGTGGTTGCAGAGCTTAGCTCCTTCCAACTTGAAACTTTACAAGCGCCTGCTATTGATGTCGGAGTCATCACTTCTATTACTCCAGATCATCTAGATCGGTATCCTTCTTTTGAGACCTATGCTCAGCTGAAAGGGCATTTAAGCGATTTGATTAAGCCGGATGGATGGCTCTTTGTCTCAAAGGAAGCGAGCGAGTTTACACGGTTTTTTTCTCTTAAGACTTCTTGCGAGATAATTGACCCGGATTCTTATTTACAACTAACGGTAAAGGAGAGATACTTAGAAAAGTTTGGTAGGGATAAAATCGCTCTTGCTTTTGCTGTTTGTAAAAAGTGGGGGATCGAGTGGGAAGCCTTGACTAGTGCCAAGCAAACATTTATTTGGCCGTCCCATAGGCTTGAATCCTTAGGCGAGATAGGTGGCGTTACGTATTATAACGATAGCAAAGGAACAAACCCCGAAGCCGTTCTTTTTGCACTCAAAAATATGGAACGCCCTGTGATTTTGATTGCAGGGGGTCTCGATAAAGGAACTTCCTTTGAGAGATGGAAGGACCCCTTTAAAGATAAAGTAAAAGGAGTTTTTGCGATTGGTCGAGCAGCTTTGCTCATTAAAAAAACACTTAGTGGTTGTTGCCCGGTTAGAGTTCGGGCAACATTAGAAGAAGCTACGCTATCCGCAAAAGCACTAGCAAAACCCGGAGAGGCCATCTTACTTTCTCCCGGGTGTTCGAGCTTCGATCAGTTTGCAAACTTTGAAGAAAGAGGAAACAGTGCCGCCGGGTCGGATCGGGATGCTTCCTTGCAATTACCTCACGCCCAAGTGACGCAAGAAATGCCTCGGGTCGTTAGTTCTCAGACTCGGACATCTCCTCAATATGGGGATCAAATTGATCAAATGCTTAGCCAATATAGTGCGAAATTAGAGGAAAAAGAGAAAACTGCTGCTATTTTGCCCCCGCCCGTTTTAACACCGGCGGCGAAAATAGAAAGTAAGTCTCCTAAAGTGCCTGCCGCTCAAAAGAACACCGAGAACTTGCGCAGTGTCATAGTTGAAAAAGGAGATGTATTAGAAAAGATTGCCCGTTCTTATGGAGTCAAAGTCGATGATATCATGAAGCTCAATAGCCTTGAAGTTGCGGCAAAACTTTGCCGTATCCCCATTATTCTATTTGAGTCGAATGTTGTCCCCGGTCGGGTTAACCGTTTTTGTTCCCGGTGGGCCGCGATTTCCGCCGTCCAATTTTTTTCTGCTGCGGACCGCCTAAAAGGGAAGACGGTTGCTGTTCAAATGCCTCTTCTGCAATATAACTCTGATGTTTGCAAAAAAAAGGCGCGTCATTATTACAATTTAGATGAAAATTGTCTGACAATTTTGGTTTTTGGAGGATCTCAAGGGGCGCATCCAATTAATCACTATTTTTGTGGCTCTCTTGAAAAACTGCTTGCAAAGAAGCTTGACTTTCAGATCATTCACATTGCCGGAAGTTCGAAGTGCGCAGAAAGACTACGGGAAGTGTATACCAAATATGAGGTGTCTGCCTGTGTAAAGCCATTTGAAGAAAAGATGGATTATGCGTGGCGTGCAGCTGACCTTAGTATTTCGCGGGCGGGATCCGCAACTCTTGCCGAGCAAATTGAGTTTGGTATCCCCGGTATTCTCATCCCATATCCTTATGGAACGGAAGACCACCAAGGAATGAATGCGGCTTTTCTTGCTGATAAAATAGGGGGCGCTATCAAAATCATGGAAACGGAGCTTTCTTCAGATGTGCTTGTGAGCACCATTGAAGCTCTTCTTGACTCCTCTAAAGAAAGCTATGGAAAAGAAGCCGATGTCTCATTGAGAATGACAGAGTTTAGTCAAAACGAAAACGGGATTAAGTTTTCCGCTACTTTTAAGGAAAAATCGCTTTTTGACTTGTATGTTCCTGTGCTAGGAGAACATCAAGCGTTAAATGCTCTAGCTGCTTGTGGACTGGCTTTGCAACTCGGCGTTAAGGAGAGTGAGGTGCGTGAGGCTTTTACAACATTTAAAGGAGTGAGCCGACGCTTAGAAAAAAAAGGAGAGGTGAAGGGAATCACACTTTATGATGACTATGCGCATCATCCCACCGAAATTCACCAGATGCTAAGTGCTCTCAAAGCTGCAGTAGGGAAAAAAAGGCTCGTTGCCGTTTTCCAGCCTCACCGCTACACAAGAACCGCCGACTTAATCGAAAGGTTTGCCTCTTCTTTTTCTGCCTCTGATGTGTGTGTTATTACAGATGTATATGCGGCCGGAGAACTTCCAATCAAAGGAGATGCTGAGAACCTCGCAATGGATCGAGACAAGTTCCTATTTCCCTTCTTTCCGTTTTTTACTCCCAAGAAAATGACGCAATTCTACTTAGGGCTTAGGTCATTAAACGGTATTTGGAACCGCCCACTTGAAGCAACACCGGTTGATTTAGCATTTCAAATCTTTGACTTTCTTCAAGATAAACCCTTTTTTATTTCTCGAATCGATGTATCTCAAGCCGAAGCGAAGAATTTGGGGAAGCGAGAAGTGGTTGTTGTGCTCGAGAAAGGCCACAACTATCATTACTTACGCCTCACCCCCAAGAAATTCAAGAAGCAGCTCAAGCACTACTTTAAGCTTTGCCAAGAAGTCGAATATAATGAAGATATTATGGTAGATTTACGAGTTCCTCAACTAGCTTTTATTCAAAAGAGCGTGGGGTCAAAAATGTCAGTTGGGTTAAGTATTAATATCGAAGAAGAAAAAGGGAAGACGATTATCCGTATCGAAGGACGGATGGATGCAGCTAACTCTCCCAAGTTAGAGTCGAAACTCGAAGAACTTGTTAAAGGAGGAAAGACTCAATTGCTCCTTGATTTTGCGAAAGTGGATTACTTAAGTAGCGCGGGAATGCGCCTTCTGCTTTCAATGACCAAAAAACTGTCGGATAAAGGTGGATTTAATGTGTACTCCATTAATGAAGAACAGAAAGAGCTCCCCCCCTATTTAAGGAAAAGGGTGATTGTCATTGCCGGTCCAACTGCTTCAGGGAAAACACGACTTTCCCTTGAACTTGCCAAGCTTGTTGATGGTGAGATCATCTCAGCAGACTCTGTTCAGGTTTATCGTGGGATGGACATCGGAACGGCCAAATCCACATTAGAGCAGCGTCAACAAATCCCTCACCACTTAATCGATGTCTGCGAGCTTTCCGAAACATTTAATGTTGTTCAATTTTATGAACATGCTATAGAGAGAATTCGAGAAATTTTAGCTCGAGGCACCACCCCTATTGTTGTAGGAGGAACCGGCTTTTACCTCCATTCTCTTTTATATGGGCCTCCTCAAGGTCCTCCCGCATCACCTGAAATTCGACAGAAGCTCGAACAAGATCTCGACAAATTCGGAACGGAGGCTTTGTATGAAAAACTTTGCCAGTTCGACCCTGATTATGGAAGGACCATTAATCAACGAGATCGACATAAAATCATCCGGGGCCTTGAAATCATGTCCCTGACGGGAAAGAGAGTGTCAGATTTTCCGAAAGACAACAAAACTGAGAAGCTCAAAGAATTTGATTTTCGATGTTGGTTTATTTACTTTCCTAAAGAAATCCTTTACCCTCGAATTGAAATGCGGTGCGACGAAATGATTGCAAAAGGTTTTATTGAAGAAGTCAAGTATCTGGAGTCCATAGGGATTAAAGAGAATTTATCCGCTTCGCAAGCTATTGGGTATCGTCAATGCTTGGAGTTCCTTAATTCTGATCATAGCGATGAAGACTGGGAACATTTTGTTTGGGAGTTCAAAAAAACGAGTCGCAGTGAGACTTTCGAAAAAACAAAGAGCTCTGAAGAGAAGATTCAGCTTGCAATTGCTTTCATGAAAAGTGTCCTTTCTCAGCCTGAAGGAGGTACTCTCAAAGACTTTTGGGATGCCAAAAAACTCTGCGGACCTATTTTTAAAGAGCAGCTGAATCCCATCAAGCGGAATCATCTTTGGTCGGAATATGTAGAGCTTGTTCAAGAAGCCCGCCGCCTAAAAGAAATCATGGATGAGCAGGCAGCTTTTTCTATTGAACAGATAGACCTGGCAATCGAAGCACTAGAAACCGATATGGGTCGCTATGAACAACTGATTGCACAATTGCCTCACCTCACCTTCCCAAAATCTTCTAAAGACATTCTCACAAAACATGAACTTTACGATATGAGTCAACGTGAACTCAATCTTTTGAAAACTTTGATTTCTCGCCTTGATGGCTTGAGGAAAGAGGTTATCGGAACTGATATGAGAATTAGTCAAAAAAATCGAATCTTAAAGCGTCTCTCTAAGTTAGGTGACATTGTTTTCCCAAAGCGCAAAGAACTTATCAAGCAAGTAAGTGATCAGTTTATTCAAGATGTTGAAACTTTTGCCCTAGAAAGATTTCCTAAAGAAGGATCGGAGTCTAAGCAAAGCCGCACAACGCCTAATTATGTGATTCGCGAAGAAATCAAGAACTTTCAGGGGCTAGCAAAACTTTTGACTCTCAATACCCATGCTTTTACAAAAACTCGTAAGATACTCAGTGAGTGCTGGGATGTCATTaaagaaaaagacaaggaaagaaaaaaggaatttggagaaaaaagtaaagagcaaaaggaaaaCTTTTTCAAAATCTCGGAGAAGGTAAAGTCTTTTCAAGAATTTTGTGAAAAGCCGGAAAACCTTGTGAAGGAAAAAATCCTTCAAGAGTCTCATGCCATTTTTAATGAGATGAAGACCCTTTCTTTTGGCCGTGACTCCATTCGAGCCCTGCGCGAAGAAATTCAAAAGACTCAAAAAGAGGCTCTTGGTAAGATTGAAGAAAAATCCTCTCAAAAAAGAAAAGAGGAGAGAAAGAAAGTCGAAGATCTCAGAGAAAGACTTTCGACTCTCATTGGAGGTGAGCAAAAAACATCTCTCGAAGAGCTGCTCAAACAAGAGAAAGCTCTTGTTGAAGAATATGAAACTTTTGATCTGCCCCAAATCGATCAACATGCTTTTGAGCGGCAATTCTCAGATATCTCGAGTTTTATCCTTGATAAGAAAGGAGAAAAAGCTATATCGAAAGAGGAGTTTGAGGCTTTATATGAAGCTCGAATCAATCTATTAGAAGAGATTAAAACTCAAGTTGAAATCTACCGTAAAGAAATGGGGGGATCTGGGCTTGACTTTGAAAAAGGGATGGCCTATCGTGAGCTTTATGATAGCGCTAAAATTCATCTAGATAAAGATACGGAAGCGTTAAATAATCTCGAAGAAAAACTTGACCAGCTAGAATCTTGA

Transcript

scaffold121.g9.t1

CTCTATCGGTGATTTTACAGGTAATCAGTTACCGCTTTCGCAATAAGAAGAGGATCTTTCGCTGCGCTCCGCTTCACCATCATTTTGAGTTTAAAGGATGGCCCGAGTCAAAGGTTGTAATCCGGTTTTGGATTATTGGGTTGATTCTCGCCTTAGCGGGGCTCGCTTCAATCAAATTTCAATAGGAGGTTTGATGCAAGCACTTGTCATTGGTTTAGGGAAAAGTGGTCGGGGAGCCGCCAGGTTTCTTCGGCATTTAGGTTATAAAGTTACAGGAGTGGACCGGTTGCTCGCAGGAAAAAAGCTAGAAGGGGTTTATCTTTTTTCTGAAGAAGAATCGTTGCCTCATTTTGATTTTGATATTGTGATTTTATCTCCGGGCATTCCTCAAACCCACCCACTGGCATTGAGAGCTCAAAGACAGGGAATAAAGCTCATGGGAGAAGCGGAGTTGGCTCTGCGTCACTTAAAAAATCCGTGTATTGGCATCACAGGAACAAATGGAAAAACGACATTAACCCTACTCATTGCGCATATATTGAATACTTGTGGAAAAAAAGCGCGGGCATTAGGCAATGTTGGAGAAAGTTTAGCCGGAAACTTAATCGACCTTGATCCTGAAATAATTGTGGTTGCAGAGCTTAGCTCCTTCCAACTTGAAACTTTACAAGCGCCTGCTATTGATGTCGGAGTCATCACTTCTATTACTCCAGATCATCTAGATCGGTATCCTTCTTTTGAGACCTATGCTCAGCTGAAAGGGCATTTAAGCGATTTGATTAAGCCGGATGGATGGCTCTTTGTCTCAAAGGAAGCGAGCGAGTTTACACGGTTTTTTTCTCTTAAGACTTCTTGCGAGATAATTGACCCGGATTCTTATTTACAACTAACGGTAAAGGAGAGATACTTAGAAAAGTTTGGTAGGGATAAAATCGCTCTTGCTTTTGCTGTTTGTAAAAAGTGGGGGATCGAGTGGGAAGCCTTGACTAGTGCCAAGCAAACATTTATTTGGCCGTCCCATAGGCTTGAATCCTTAGGCGAGATAGGTGGCGTTACGTATTATAACGATAGCAAAGGAACAAACCCCGAAGCCGTTCTTTTTGCACTCAAAAATATGGAACGCCCTGTGATTTTGATTGCAGGGGGTCTCGATAAAGGAACTTCCTTTGAGAGATGGAAGGACCCCTTTAAAGATAAAGTAAAAGGAGTTTTTGCGATTGGTCGAGCAGCTTTGCTCATTAAAAAAACACTTAGTGGTTGTTGCCCGGTTAGAGTTCGGGCAACATTAGAAGAAGCTACGCTATCCGCAAAAGCACTAGCAAAACCCGGAGAGGCCATCTTACTTTCTCCCGGGTGTTCGAGCTTCGATCAGTTTGCAAACTTTGAAGAAAGAGGAAACAGTGCCGCCGGGTCGGATCGGGATGCTTCCTTGCAATTACCTCACGCCCAAGTGACGCAAGAAATGCCTCGGGTCGTTAGTTCTCAGACTCGGACATCTCCTCAATATGGGGATCAAATTGATCAAATGCTTAGCCAATATAGTGCGAAATTAGAGGAAAAAGAGAAAACTGCTGCTATTTTGCCCCCGCCCGTTTTAACACCGGCGGCGAAAATAGAAAGTAAGTCTCCTAAAGTGCCTGCCGCTCAAAAGAACACCGAGAACTTGCGCAGTGTCATAGTTGAAAAAGGAGATGTATTAGAAAAGATTGCCCGTTCTTATGGAGTCAAAGTCGATGATATCATGAAGCTCAATAGCCTTGAAGTTGCGGCAAAACTTTGCCGTATCCCCATTATTCTATTTGAGTCGAATGTTGTCCCCGGTCGGGTTAACCGTTTTTGTTCCCGGTGGGCCGCGATTTCCGCCGTCCAATTTTTTTCTGCTGCGGACCGCCTAAAAGGGAAGACGGTTGCTGTTCAAATGCCTCTTCTGCAATATAACTCTGATGTTTGCAAAAAAAAGGCGCGTCATTATTACAATTTAGATGAAAATTGTCTGACAATTTTGGTTTTTGGAGGATCTCAAGGGGCGCATCCAATTAATCACTATTTTTGTGGCTCTCTTGAAAAACTGCTTGCAAAGAAGCTTGACTTTCAGATCATTCACATTGCCGGAAGTTCGAAGTGCGCAGAAAGACTACGGGAAGTGTATACCAAATATGAGGTGTCTGCCTGTGTAAAGCCATTTGAAGAAAAGATGGATTATGCGTGGCGTGCAGCTGACCTTAGTATTTCGCGGGCGGGATCCGCAACTCTTGCCGAGCAAATTGAGTTTGGTATCCCCGGTATTCTCATCCCATATCCTTATGGAACGGAAGACCACCAAGGAATGAATGCGGCTTTTCTTGCTGATAAAATAGGGGGCGCTATCAAAATCATGGAAACGGAGCTTTCTTCAGATGTGCTTGTGAGCACCATTGAAGCTCTTCTTGACTCCTCTAAAGAAAGCTATGGAAAAGAAGCCGATGTCTCATTGAGAATGACAGAGTTTAGTCAAAACGAAAACGGGATTAAGTTTTCCGCTACTTTTAAGGAAAAATCGCTTTTTGACTTGTATGTTCCTGTGCTAGGAGAACATCAAGCGTTAAATGCTCTAGCTGCTTGTGGACTGGCTTTGCAACTCGGCGTTAAGGAGAGTGAGGTGCGTGAGGCTTTTACAACATTTAAAGGAGTGAGCCGACGCTTAGAAAAAAAAGGAGAGGTGAAGGGAATCACACTTTATGATGACTATGCGCATCATCCCACCGAAATTCACCAGATGCTAAGTGCTCTCAAAGCTGCAGTAGGGAAAAAAAGGCTCGTTGCCGTTTTCCAGCCTCACCGCTACACAAGAACCGCCGACTTAATCGAAAGGTTTGCCTCTTCTTTTTCTGCCTCTGATGTGTGTGTTATTACAGATGTATATGCGGCCGGAGAACTTCCAATCAAAGGAGATGCTGAGAACCTCGCAATGGATCGAGACAAGTTCCTATTTCCCTTCTTTCCGTTTTTTACTCCCAAGAAAATGACGCAATTCTACTTAGGGCTTAGGTCATTAAACGGTATTTGGAACCGCCCACTTGAAGCAACACCGGTTGATTTAGCATTTCAAATCTTTGACTTTCTTCAAGATAAACCCTTTTTTATTTCTCGAATCGATGTATCTCAAGCCGAAGCGAAGAATTTGGGGAAGCGAGAAGTGGTTGTTGTGCTCGAGAAAGGCCACAACTATCATTACTTACGCCTCACCCCCAAGAAATTCAAGAAGCAGCTCAAGCACTACTTTAAGCTTTGCCAAGAAGTCGAATATAATGAAGATATTATGGTAGATTTACGAGTTCCTCAACTAGCTTTTATTCAAAAGAGCGTGGGGTCAAAAATGTCAGTTGGGTTAAGTATTAATATCGAAGAAGAAAAAGGGAAGACGATTATCCGTATCGAAGGACGGATGGATGCAGCTAACTCTCCCAAGTTAGAGTCGAAACTCGAAGAACTTGTTAAAGGAGGAAAGACTCAATTGCTCCTTGATTTTGCGAAAGTGGATTACTTAAGTAGCGCGGGAATGCGCCTTCTGCTTTCAATGACCAAAAAACTGTCGGATAAAGGTGGATTTAATGTGTACTCCATTAATGAAGAACAGAAAGAGCTCCCCCCCTATTTAAGGAAAAGGGTGATTGTCATTGCCGGTCCAACTGCTTCAGGGAAAACACGACTTTCCCTTGAACTTGCCAAGCTTGTTGATGGTGAGATCATCTCAGCAGACTCTGTTCAGGTTTATCGTGGGATGGACATCGGAACGGCCAAATCCACATTAGAGCAGCGTCAACAAATCCCTCACCACTTAATCGATGTCTGCGAGCTTTCCGAAACATTTAATGTTGTTCAATTTTATGAACATGCTATAGAGAGAATTCGAGAAATTTTAGCTCGAGGCACCACCCCTATTGTTGTAGGAGGAACCGGCTTTTACCTCCATTCTCTTTTATATGGGCCTCCTCAAGGTCCTCCCGCATCACCTGAAATTCGACAGAAGCTCGAACAAGATCTCGACAAATTCGGAACGGAGGCTTTGTATGAAAAACTTTGCCAGTTCGACCCTGATTATGGAAGGACCATTAATCAACGAGATCGACATAAAATCATCCGGGGCCTTGAAATCATGTCCCTGACGGGAAAGAGAGTGTCAGATTTTCCGAAAGACAACAAAACTGAGAAGCTCAAAGAATTTGATTTTCGATGTTGGTTTATTTACTTTCCTAAAGAAATCCTTTACCCTCGAATTGAAATGCGGTGCGACGAAATGATTGCAAAAGGTTTTATTGAAGAAGTCAAGTATCTGGAGTCCATAGGGATTAAAGAGAATTTATCCGCTTCGCAAGCTATTGGGTATCGTCAATGCTTGGAGTTCCTTAATTCTGATCATAGCGATGAAGACTGGGAACATTTTGTTTGGGAGTTCAAAAAAACGAGTCGCAGTGAGACTTTCGAAAAAACAAAGAGCTCTGAAGAGAAGATTCAGCTTGCAATTGCTTTCATGAAAAGTGTCCTTTCTCAGCCTGAAGGAGGTACTCTCAAAGACTTTTGGGATGCCAAAAAACTCTGCGGACCTATTTTTAAAGAGCAGCTGAATCCCATCAAGCGGAATCATCTTTGGTCGGAATATGTAGAGCTTGTTCAAGAAGCCCGCCGCCTAAAAGAAATCATGGATGAGCAGGCAGCTTTTTCTATTGAACAGATAGACCTGGCAATCGAAGCACTAGAAACCGATATGGGTCGCTATGAACAACTGATTGCACAATTGCCTCACCTCACCTTCCCAAAATCTTCTAAAGACATTCTCACAAAACATGAACTTTACGATATGAGTCAACGTGAACTCAATCTTTTGAAAACTTTGATTTCTCGCCTTGATGGCTTGAGGAAAGAGGTTATCGGAACTGATATGAGAATTAGTCAAAAAAATCGAATCTTAAAGCGTCTCTCTAAGTTAGGTGACATTGTTTTCCCAAAGCGCAAAGAACTTATCAAGCAAGTAAGTGATCAGTTTATTCAAGATGTTGAAACTTTTGCCCTAGAAAGATTTCCTAAAGAAGGATCGGAGTCTAAGCAAAGCCGCACAACGCCTAATTATGTGATTCGCGAAGAAATCAAGAACTTTCAGGGGCTAGCAAAACTTTTGACTCTCAATACCCATGCTTTTACAAAAACTCGTAAGATACTCAGTGAGTGCTGGGATGTCATTaaagaaaaagacaaggaaagaaaaaaggaatttggagaaaaaagtaaagagcaaaaggaaaaCTTTTTCAAAATCTCGGAGAAGGTAAAGTCTTTTCAAGAATTTTGTGAAAAGCCGGAAAACCTTGTGAAGGAAAAAATCCTTCAAGAGTCTCATGCCATTTTTAATGAGATGAAGACCCTTTCTTTTGGCCGTGACTCCATTCGAGCCCTGCGCGAAGAAATTCAAAAGACTCAAAAAGAGGCTCTTGGTAAGATTGAAGAAAAATCCTCTCAAAAAAGAAAAGAGGAGAGAAAGAAAGTCGAAGATCTCAGAGAAAGACTTTCGACTCTCATTGGAGGTGAGCAAAAAACATCTCTCGAAGAGCTGCTCAAACAAGAGAAAGCTCTTGTTGAAGAATATGAAACTTTTGATCTGCCCCAAATCGATCAACATGCTTTTGAGCGGCAATTCTCAGATATCTCGAGTTTTATCCTTGATAAGAAAGGAGAAAAAGCTATATCGAAAGAGGAGTTTGAGGCTTTATATGAAGCTCGAATCAATCTATTAGAAGAGATTAAAACTCAAGTTGAAATCTACCGTAAAGAAATGGGGGGATCTGGGCTTGACTTTGAAAAAGGGATGGCCTATCGTGAGCTTTATGATAGCGCTAAAATTCATCTAGATAAAGATACGGAAGCGTTAAATAATCTCGAAGAAAAACTTGACCAGCTAGAATCTTGACCAACCAAATATCAATTAGCGCCTTTGATCTTGATCATACATTAATCGAAGCGAACAGTAGCTTTCTTTTTTATCAATACTTAGTAAAAAAAGGATTTTTTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6MBT2	tRNA dimethylallyltransferase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=miaA PE=3 SV=1
Q6MBS4	UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=murD PE=3 SV=1
Q5L530	tRNA dimethylallyltransferase OS=Chlamydia abortus (strain DSM 27085 / S26/3) OX=218497 GN=miaA PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0015850 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01740 all species →	STAS	STAS domain	Domain	Interproscan
PF02875 all species →	Mur_ligase_C	Mur ligase family, glutamate ligase domain	Domain	Interproscan
PF04101 all species →	Glyco_tran_28_C	Glycosyltransferase family 28 C-terminal domain	Domain	Interproscan
PF01476 all species →	LysM	LysM domain	Domain	Interproscan
PF08245 all species →	Mur_ligase_M	Mur ligase middle domain	Domain	Interproscan
PF01715 all species →	IPPT	IPP transferase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002645 all species →	Domain	STAS domain	Interproscan
IPR036615 all species →	Homologous_superfamily	Mur ligase, C-terminal domain superfamily	Interproscan
IPR004101 all species →	Domain	Mur ligase, C-terminal	Interproscan
IPR036779 all species →	Homologous_superfamily	LysM domain superfamily	Interproscan
IPR018392 all species →	Domain	LysM domain	Interproscan
IPR007235 all species →	Domain	Glycosyl transferase, family 28, C-terminal	Interproscan
IPR018022 all species →	Family	IPP transferase	Interproscan
IPR036565 all species →	Homologous_superfamily	Mur-like, catalytic domain superfamily	Interproscan
IPR036513 all species →	Homologous_superfamily	STAS domain superfamily	Interproscan
IPR005762 all species →	Family	UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD	Interproscan
IPR013221 all species →	Domain	Mur ligase, central	Interproscan
IPR018109 all species →	Conserved_site	Folylpolyglutamate synthetase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43692 all species →	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan
GO:0016881 all species →	Molecular Function	acid-amino acid ligase activity	Interproscan
GO:0016758 all species →	Molecular Function	hexosyltransferase activity	Interproscan
GO:0008033 all species →	Biological Process	tRNA processing	Interproscan
GO:0052381 all species →	Molecular Function	tRNA dimethylallyltransferase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008360 all species →	Biological Process	regulation of cell shape	Interproscan
GO:0008764 all species →	Molecular Function	UDP-N-acetylmuramoylalanine-D-glutamate ligase activity	Interproscan
GO:0051301 all species →	Biological Process	cell division	Interproscan
GO:0004326 all species →	Molecular Function	tetrahydrofolylpolyglutamate synthase activity	Interproscan
GO:0009396 all species →	Biological Process	folic acid-containing compound biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold121.g9.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Co-expression network

Genes whose expression across the transcriptome samples of Morbakka virulenta tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Morbakka virulenta, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	no expression matrix	–
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →