Gene detail

Detailed information of scaffold3.g46.t2 in Morbakka virulenta

Genomic Location: scaffold3:2157895...2164507
NR annotation: XP_028406596.1, protein zwilch homolog [Dendronephthya gigantea]
Species Morbakka virulenta · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold3.g46.t2

ATGGAGTCGTACAATCACTCACCGAGTCAAGATGACTCCATGGGAGACTTTCGCAATTTACACAACTTCCAGGAGAATATTGGACCGTTTTCAAGTTTTCTTCAAGGAACCTTAGCTAGTGCTATGAGTACAGAAGATGTGAGTCCAGTTTATCGTTTTAAAGAGTGGTGCTTCCATCTCATTCGCCCAGGATCACAAAATGCAACTGTTCTTCTTTGCGGTCTGGAAGATGTTTGGACTGTACCGAGTATTCCTATATTTGTTGTGGGAAAAGTTAACGACTCGTCTTATATGGAGTCAACAAAAATTGACGAAAGCTCCGCTAATTCCATTTGCCAGAACAAAACAGAGCCAAGGATTGAAATTTACACCAATGAAACGGTCTGGGCAGGACAGGGACTCTCAAGTCAAATTAACTTTTTGCATTCATCAATGAATTTCCGTCCCATTCAGGATATCAAAAAGGTAACCTACGTTGATCATTCTCAGGTTCCTGCCATCCACGTTACTGAAGCAAGATTTATTTCTTCAATGGTGAACATTTGGTTGCAAAAAATAGTTAAGTCAAAAGGAAATAAAGCGTCCTCATTGCAGTTGCCAGCATTGCTGTTCAAGTGTGACAATAGTAAACCAGAATGTGTTTCATGGCTCTTTTCTCACTTAGAAATAGGATCAGATGGAAAAGGATTAATTTGCAACAAGAAATCATTTATTGTGAATGAACTATCTACAAATAGTTCGACACATTGGCCACTTTTCAGTAAACTTGAATCTGGGAGTAAAATAGACATTTTTCAGAAGGATATCAAAAAGGTAACCTACGTTGATCATTCTCAGGTTCCTGCCATCCACGTTACTGAAGCAAGATTTATTTCTTCAATGGTGAACATTTGGTTGCAAAAAATAGTTCAGTCAAAAGGAAATAAAGCGTCCTCATTGCAGTTGCCAGCATTGCTGTTCAAGTGTGACAATAGTAAACCAGAATGTGTTTCATGGCTCTTTTCTCACTTAGAAATAGGATCAGATGGAAAAGGATTAATTTGCAACAAGAAATCATTTATTGTGAATGAACTATCTACAAATAGTTCGACACATTGGCCACTTTTCAGTAAACTTGAATCTGGGAGTAAAATAGACATTTTTCAGAAGGTTAGCCAAGATAATTTAAGAACATACCTCTCCCACTATGATCTACACAGTAGCGAGTTGTTTGGTAACTCAACAGCTACAGTTGATTTTTGCTGGCAGGGATTTAGCAAACCACTGTCGCACCCGCCACCTGGTAGTAACGCAGTAATTAAATTTAAGGCTTACCCAAGAAACCCTATGTCAGTAGCAAACTCAATATTTCAAGAGGTTATGCAGCTTTATGATATTTTTGATTGCATTCAGAGTCGCAGTTGGCCGTTTAATAAGGTTATCGACAATTTTGATATGAAAGTCGAGGAGTTTATCAAGTCTTTAGCTAAAGAGAAAGAAACAAAAGAAGGCGAAAAAGTCGACGGCGAAAAAGTCGACGGCGATGGTAGCACCATTTCTGCGCCAGAATCACCCGTGTACGACTTGCTTCTGAGAGAATTCAGTCGTAAAGACATGGACTTTACAGATGACCTTTGGACTTTCTTGAAAGAACTTGGCAGCGTCGATCAGGTAAAAAGTGCGCTTCGTCGAGTTTTTAGTGCTATTTTTGCAAGAAGTTTACAGCCGGTTTTGTCAAGTATGAATAAAACGGCCTTTGCTGAGTCTCTTCGAGATTTTTACCGAAATGTTGGTGTTGTACAGAATATGAAACCCTACCATGACAAAATACACGAACTGATAAATGGAGCTGAGCAACTTCTGGAAGTTCTAGTTGAGATTGGTATTCAAAAATTGATTAGTGATTACATGGTTTACTTCCAAAAAATGGAGGTGGCGACACAATTGCAGTTGGATCGAGTAATTGGAGATATCTCTGTTCAAAAGAATGCATTAATTGGTATTAAAAAGTTACATTATGCTCTTGAGATAATTCTTCTGGCCAAAATGCACTTTCGATTAACGGATGATCTTCTTCGTACACTTTCAAAGTCTGTGCTCGATTATTATACTTTTAACAACCCAGGGAACTCAACACCTTATTTTGCATTAGCAGTACCCTCGTATGCTGCTTCGGCAACCACAGTGCACAAAAAATGTATAAATCTAATTCCCGAGAAATGGAAATGCACTATTCCTTTAAAGCATAAGGTTACAGGCTGTGAAGATCGCCTAATATTTGTTTTTACTTACAATACAAACGATGCAGACTTTGACTTATCAAATAGTAATGACAATGAAGCAGGCGCTGAAAATGGCCCACAGGCCAATATAGTTTATGCGCGGACTTCCTTTCTGCGTATTGCATGA

Transcript

scaffold3.g46.t2

TTCTGAAAAGTTAGAAAATAGGTAAAGAAGAATGGAGTCGTACAATCACTCACCGAGTCAAGATGACTCCATGGGAGACTTTCGCAATTTACACAACTTCCAGGAGAATATTGGACCGTTTTCAAGTTTTCTTCAAGGAACCTTAGCTAGTGCTATGAGTACAGAAGATGTGAGTCCAGTTTATCGTTTTAAAGAGTGGTGCTTCCATCTCATTCGCCCAGGATCACAAAATGCAACTGTTCTTCTTTGCGGTCTGGAAGATGTTTGGACTGTACCGAGTATTCCTATATTTGTTGTGGGAAAAGTTAACGACTCGTCTTATATGGAGTCAACAAAAATTGACGAAAGCTCCGCTAATTCCATTTGCCAGAACAAAACAGAGCCAAGGATTGAAATTTACACCAATGAAACGGTCTGGGCAGGACAGGGACTCTCAAGTCAAATTAACTTTTTGCATTCATCAATGAATTTCCGTCCCATTCAGGATATCAAAAAGGTAACCTACGTTGATCATTCTCAGGTTCCTGCCATCCACGTTACTGAAGCAAGATTTATTTCTTCAATGGTGAACATTTGGTTGCAAAAAATAGTTAAGTCAAAAGGAAATAAAGCGTCCTCATTGCAGTTGCCAGCATTGCTGTTCAAGTGTGACAATAGTAAACCAGAATGTGTTTCATGGCTCTTTTCTCACTTAGAAATAGGATCAGATGGAAAAGGATTAATTTGCAACAAGAAATCATTTATTGTGAATGAACTATCTACAAATAGTTCGACACATTGGCCACTTTTCAGTAAACTTGAATCTGGGAGTAAAATAGACATTTTTCAGAAGGATATCAAAAAGGTAACCTACGTTGATCATTCTCAGGTTCCTGCCATCCACGTTACTGAAGCAAGATTTATTTCTTCAATGGTGAACATTTGGTTGCAAAAAATAGTTCAGTCAAAAGGAAATAAAGCGTCCTCATTGCAGTTGCCAGCATTGCTGTTCAAGTGTGACAATAGTAAACCAGAATGTGTTTCATGGCTCTTTTCTCACTTAGAAATAGGATCAGATGGAAAAGGATTAATTTGCAACAAGAAATCATTTATTGTGAATGAACTATCTACAAATAGTTCGACACATTGGCCACTTTTCAGTAAACTTGAATCTGGGAGTAAAATAGACATTTTTCAGAAGGTTAGCCAAGATAATTTAAGAACATACCTCTCCCACTATGATCTACACAGTAGCGAGTTGTTTGGTAACTCAACAGCTACAGTTGATTTTTGCTGGCAGGGATTTAGCAAACCACTGTCGCACCCGCCACCTGGTAGTAACGCAGTAATTAAATTTAAGGCTTACCCAAGAAACCCTATGTCAGTAGCAAACTCAATATTTCAAGAGGTTATGCAGCTTTATGATATTTTTGATTGCATTCAGAGTCGCAGTTGGCCGTTTAATAAGGTTATCGACAATTTTGATATGAAAGTCGAGGAGTTTATCAAGTCTTTAGCTAAAGAGAAAGAAACAAAAGAAGGCGAAAAAGTCGACGGCGAAAAAGTCGACGGCGATGGTAGCACCATTTCTGCGCCAGAATCACCCGTGTACGACTTGCTTCTGAGAGAATTCAGTCGTAAAGACATGGACTTTACAGATGACCTTTGGACTTTCTTGAAAGAACTTGGCAGCGTCGATCAGGTAAAAAGTGCGCTTCGTCGAGTTTTTAGTGCTATTTTTGCAAGAAGTTTACAGCCGGTTTTGTCAAGTATGAATAAAACGGCCTTTGCTGAGTCTCTTCGAGATTTTTACCGAAATGTTGGTGTTGTACAGAATATGAAACCCTACCATGACAAAATACACGAACTGATAAATGGAGCTGAGCAACTTCTGGAAGTTCTAGTTGAGATTGGTATTCAAAAATTGATTAGTGATTACATGGTTTACTTCCAAAAAATGGAGGTGGCGACACAATTGCAGTTGGATCGAGTAATTGGAGATATCTCTGTTCAAAAGAATGCATTAATTGGTATTAAAAAGTTACATTATGCTCTTGAGATAATTCTTCTGGCCAAAATGCACTTTCGATTAACGGATGATCTTCTTCGTACACTTTCAAAGTCTGTGCTCGATTATTATACTTTTAACAACCCAGGGAACTCAACACCTTATTTTGCATTAGCAGTACCCTCGTATGCTGCTTCGGCAACCACAGTGCACAAAAAATGTATAAATCTAATTCCCGAGAAATGGAAATGCACTATTCCTTTAAAGCATAAGGTTACAGGCTGTGAAGATCGCCTAATATTTGTTTTTACTTACAATACAAACGATGCAGACTTTGACTTATCAAATAGTAATGACAATGAAGCAGGCGCTGAAAATGGCCCACAGGCCAATATAGTTTATGCGCGGACTTCCTTTCTGCGTATTGCATGATTAAGCAGTAGCGGTTTCCTTTTGCACGACAACATAAGGCAGGATACCAACCAGAACTGCAAATTATTTATCATGTATTTTAGGAAAGTACCTAGAGAGCAATAAAAATAGCACAACATTAAGTATAAAATCCAGTAGTTTTATTGTAATATTGGTAAGGAACATATCAGTTTCCAAGTTAAATTTGTTTTGGAAAATGGCCCCACCTCTTAAGTCGATTACCATGGCTTTTTTGTCACATGAAAAATAAAGGAAGCACACGCCCCCTTCGTTTCAAAATATTGAAAGTGAGGGAAGATAGTATTGTTTTGTCTCTAGTTTTTATGTGACCATCAGACATAGCAGTTGGTCGAGTATTTGTGTTTACTAATGTCGTATATTTCTTATTTTGTTAAGAAAactcccgttgattc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6QM04	Protein zwilch homolog OS=Bos taurus OX=9913 GN=ZWILCH PE=2 SV=1
Q8R060	Protein zwilch homolog OS=Mus musculus OX=10090 GN=Zwilch PE=1 SV=1
Q9H900	Protein zwilch homolog OS=Homo sapiens OX=9606 GN=ZWILCH PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008318 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09817 all species →	Zwilch	RZZ complex, subunit zwilch	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018630 all species →	Family	RZZ complex, subunit Zwilch	Interproscan
IPR037190 all species →	Homologous_superfamily	LIS1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15995 all species →	PROTEIN ZWILCH HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007093 all species →	Biological Process	mitotic cell cycle checkpoint signaling	Interproscan
GO:0007094 all species →	Biological Process	mitotic spindle assembly checkpoint signaling	Interproscan
GO:0034501 all species →	Biological Process	protein localization to kinetochore	Interproscan
GO:1990423 all species →	Cellular Component	RZZ complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11579	ZWILCH; protein zwilch	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.