Gene detail

Detailed information of scaffold42.g94.t2 in Morbakka virulenta

Genomic Location: scaffold42:2761346...2793763
NR annotation: GFR16278.1, s-adenosylmethionine mitochondrial carrier protein [Trichonephila clavata]
Species abbreviation MVIRU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

scaffold42.g94.t2

actagtagcaaagcgaagatggtctatgctaggtcatgtcctacgcatggacatcaacacccccacccagaaagcccttgaattcgccatatcaggagcaacaatgtataaagccagaataggacgccactctacaaatcttctcagcaccatccgtgaagacatcaaaaactccggacttgggcaactccgtaccagaaaacagctccagagcctaagggaaaaagcaagagagaagaagaactggaaacgtttcaacgaaggtctgattgcatctatgggatgtcctcgactaccaaagaagcagaacacagaggataaacactTTGTTGTAAATAAGATTCCGAAGGTCAAAACGTTTCAGCATCATTTATATATCGCAAAAAGGCTTTCAAAAGAAAATCAGCAGAGAGCTCAAAAAGCATTTCCTACCTAACAGATAAAGATTTTGCATGGAAAATACCACAAATAAAAACAAGTAACCTTGCAAGTGACATGACACAACACAGCTTATTGCACCATGAAATAACATAGAGATGAACGTTGTTAATAAATGACTTGGTTTCAAGCGTAACTGGAGTTTTGAACTTCTGAAATTTACAAGCAATTGAGAAGAGTTGATTTGGAAATTGTAAGGTGATGTGACTGCAACTGGTGTGTTAAGTTGCAGAGTCATAGCAACCAAGACATGCATGATGAAAATGACTTTCTGGTGCCTTTGCTGGCAGGTGGGCTTGCGGGTGTAGCAGTTGATTTAAGCCTTTTTCCATTAGATACTATGAAAACAAGACTGCAGTCATCAGCAGGGTTTTTCAAGGCTGGTGGATTTAAAAATATATACAGAGGCATTAGTTCTGCTGCCATGGGCTCATTTCCATCAGCATCACTTTTCTTCCTGTCCTACGAAGTAACGAAAAATACTTGCCGCCAATACTTTGGACCCAGCCCACTGGTTCATATGGCTTCAGCGGTGGTTGGAGAGGTGGTTTCCTGCATAGTACGTGTACCATCCGAAGTGATAAAACAAAGAGCCCAGGCTATTCAAGGTTTAAATAGCCGCACAGCCCTCATAATGACTCTTAAGCAAGAGGGTGTTCTTGGCCTTTATCGTGGCTATTTTAACAATGTAGCAAGAGACGTTCCATTTTCTATCATTCAGTTTACATGTTGGGAATACTTCAAGATAAAACTTGAAGAATATCAGATGTCCAAAGTACAACCATGGCAATCAGCCCTTGTTGGATCCATCTCAGGAGCAATTGCAGGGGGTCTTACAACCCCTTTGGATGTCGTAAAATCTAGGGTGATGCTTGCTGAGAAAAATGCGCATATTTTGAAAACAAATATGTTTGGAGCAATGATCGATATCGCAAAAATTGATGGTCTCAGAGGATTGTTTGCTGGAATCCTACCAAGGATGGCATGGCTTTCAGTTGGAGGCTTGGTGTTTCTTGGGTCATATGATAAAGTGAAACATGTGCTTATATCACTCCCAGCACTATCGCCGACCGAAGTCATCAAATAGATTATTTTGCTTGAGTGCACACATTCTATAAGGATTCCACAGATTCAGACTTACCTCTTGGAGCTTCCTTTCGGTGTCACTTGACTGATGCATCGGAGATCGGAATCTATTATGCAAGACGAGATAAAAATAATACATTTGCTCACCAGAAAGCTTCAGTTTAAACCACTTGGCTTAAGCAAAGAAAATCATAACAATGTGCTCTGAAATCCTTTAAAGTTACTGTTATGGCATTTTGAGTAACAGAAGTTAATGAACTAGCTTGAAAACGGTAAAGTTTGACCTTCCAGACAATTTGCCTCAAAGATGTTTTATCTCTTTTTACACCACCATTCTAGCTGCCCTGGATGCAATCTATGAAAGACCTATGATGTAAATTTAATTATTGTGGACATAAAACACGCAGTTAGTCCCAGTGCACCTACTAGCTTCGAAACGATGTTTAACCAAGAGAGAGAAAGACGTAAGGACTTATGGTCAACCTGATCTAGAACTGAAACTTCGGTTTTGTTGACACAGCTGTTTTATTGTCATATTTTAAAAGCAGTCAGTATTTTTTAAAGTGATGGTAGTTTTCAGTGTTTAGAATCAAAATAATTTATCATGGAATTGTATCATTTAAATTAGAATTATGGTTTAATACCCAAATTACTATTTATATTTTTTTATTATGTTTGGAAAGCTCAGGCACATCTTTAAACGGAATTAAACCAAAAATTGTTTGCTGGAATCCTACCAAGGATGGCATGGCTTTCAGTTGGAGGCTTGGTGTTTCTTGGGTCATATGATAAAGTGAAACATGTGCTTATATCACTCCCAGCACTATCGCCGACCGAAGTCATCAAATAGATTATTTTGCTTGAGTGCACACATTCTATAAGGATTCCACAGATTCAGACTTACCTCTTGGAGCTTCCTTTCGGTGTCACTTGACTGATGCATCGGAGATCGGAATCTATTATGCAAGACGAGATAAAAATAATACATTTGCTCACCAGAAAGCTTCAGTTTAAACCACTTGGCTTAAGCAAAGAAAATCATAACAATGTGCTCTGAAATCCTTTAAAGTTACTGTTATGGCATTTTGAGTAACAGAAGTTAATGAACTAGCTTGAAAACGGTAAAGTTTGACCTTCCAGACAATTTGCCTCAAAGATGTTTTATCTCTTTTTACACCACCATTCTAGCTGCCCTGGATGCAATCTATGAAAGACCTATGATGTAAATTTAATTATTGTGGACATAAAACACGCAGTTAGTCCCAGTGCACCTACTAGCTTCGAAACGATGTTTAACCAAGAGAGAGAAAGACGTAAGGACTTATGGTCAACCTGATCTAGAACTGAAACTTCGGTTTTGTTGACACAGCTGTTTTATTGTCATATTTTAAAAGCAGTCAGTATTTTTTAAAGTGATGGTAGTTTTCAGTGTTTAGAATCAAAATAATTTATCATGGAATTGTATCATTTAAATTAGAATTATGGTTTAATACCCAAATTACTATTTATATTTTTTTATTATGTTTGGAAAGCTCAGGCACATCTTTAAACGGAATTAAACCAAAAGTATAAGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6GLA2	Mitochondrial S-adenosylmethionine carrier protein OS=Xenopus tropicalis OX=8364 GN=slc25a26 PE=2 SV=1
Q641C8	Mitochondrial S-adenosylmethionine carrier protein OS=Xenopus laevis OX=8355 GN=slc25a26 PE=2 SV=1
Q4V9P0	Mitochondrial S-adenosylmethionine carrier protein OS=Danio rerio OX=7955 GN=slc25a26 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005696 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR002067 all species →	Family	Mitochondrial carrier protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45667 all species →	S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000095 all species →	Molecular Function	S-adenosyl-L-methionine transmembrane transporter activity	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15111	SLC25A26; solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.