Gene Family

Orthologous gene families (orthogroups) inferred by OrthoFinder across the cnidarian proteomes hosted here. Every family is annotated with the function that its member genes agree on: each Pfam domain, PANTHER family, GO term and KEGG orthology entry is counted across the family and reported with the fraction of member genes that carry it. 100% means the whole family agrees (the strict consensus); 80% and 50% are the relaxed tiers. Search below by function name, domain accession (e.g. PF00069), GO term (GO:0006355), KEGG orthology (K05111), or by family ID.

A family's gene count is the number of distinct annotated genes, counted per species. Two of the source proteomes (Alatina alata and Calvadosia cruxmelitensis) list one gene identifier on several different sequences; those extra sequences are shown separately as “sequences” where they occur, and are not counted twice towards the consensus below, because the underlying annotation is stored per gene identifier.

📊 23,302 gene families with a consensus annotation
Gene family Genes Species Consensus function (agreed on by the family's member genes)
OG000813918517
77% PANTHER PTHR13132 ALPHA- 1,6 -FUCOSYLTRANSFERASE 142/185
OG0008140184135
90% PANTHER PTHR23290 UNCHARACTERIZED 166/184
OG0008142184144
85% PANTHER PTHR23189 RNA RECOGNITION MOTIF-CONTAINING 157/184
OG000814418477
88% Pfam PF12796 Ank_2 — Ankyrin repeats (3 copies) 161/184
OG0008145184130
80% PANTHER PTHR31094 RIKEN CDNA 2310061I04 GENE 148/184
OG0008146184130
91% PANTHER PTHR48338 CHROMATIN TARGET OF PRMT1 PROTEIN 168/184
OG0008147184121
77% PANTHER PTHR47078 CYTOSKELETON-ASSOCIATED PROTEIN 2-LIKE 142/184
OG0008148184142
89% PANTHER PTHR11661 60S RIBOSOMAL PROTEIN L12 164/184
OG0008149184122
89% PANTHER PTHR46647 RAB9 EFFECTOR PROTEIN WITH KELCH MOTIFS 164/184
OG0008151184134
90% PANTHER PTHR11560 39S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL 166/184
OG0008152184114
91% PANTHER PTHR11158 MSF1/PX19 RELATED 168/184
OG0008153184138
86% PANTHER PTHR10412 MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 158/184
OG0008154184133
82% PANTHER PTHR46363 DEOXYRIBONUCLEASE TATDN2-RELATED 151/184
OG0008155184130
86% PANTHER PTHR11604 PROFILIN 159/184
OG0008157184118
80% PANTHER PTHR31408 HYPOTHETICAL PROTEIN LOC689986 148/184
OG0008158184141
80% Pfam PF12937 F-box-like 148/184
OG0008159184141
89% PANTHER PTHR12951 RETINAL PROTEIN 4 164/184
OG0008160184134
82% PANTHER PTHR13345 MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10 150/184
OG0008162184108
71% Pfam PF02205 WH2 motif 131/184
OG0008164184133
89% PANTHER PTHR46194 PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 164/184
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