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This orthogroup contains 184 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 184 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23189 | RNA RECOGNITION MOTIF-CONTAINING | 157 / 184 | 85.3% | 98.7% of 159 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 156 / 184 | 84.8% | 98.1% of 159 | ≥80% support |
| Pfam | PF07744 | SPOC | 153 / 184 | 83.2% | 96.2% of 159 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 160 / 184 | 87.0% | 100.0% of 160 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 158 / 184 | 85.9% | 98.8% of 160 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 157 / 184 | 85.3% | 98.1% of 160 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 157 / 184 | 85.3% | 98.1% of 160 | ≥80% support |
| GO | GO:0000381 Biological Process | regulation of alternative mRNA splicing, via spliceosome | 155 / 184 | 84.2% | 96.9% of 160 | ≥80% support |
| KEGG | K13190 | RBM15 — Spliceosome | 149 / 184 | 81.0% | 98.7% of 151 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0071.g18.t1 | XP_015764893.1 | PREDICTED: putative RNA-binding protein 15 [Acropora digitifera] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
| Alatina alata | Aala_g175.t1 | XP_020627207.1 | uncharacterized protein LOC110064491, partial [Orbicella faveolata] | P10394 Retrovirus-related Pol polyprotein from transposon 412 OS=Dr | JBrowse |
| Aurelia aurita | scaffold30.g180.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold224.g3.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000021195.1 | XP_015764893.1 | PREDICTED: putative RNA-binding protein 15 [Acropora digitifera] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
| Acropora awi | aawi_s0055.g56.t1 | XP_015764893.1 | PREDICTED: putative RNA-binding protein 15 [Acropora digitifera] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
| Acropora cervicornis | KAK2563544.1 | XP_015764893.1 | PREDICTED: putative RNA-binding protein 15 [Acropora digitifera] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
| Aurelia coerulea | evm.model.ptg000003l.305 | XP_015764893.1 | PREDICTED: putative RNA-binding protein 15 [Acropora digitifera] | Q6PHZ5 Putative RNA-binding protein 15B OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora cytherea | acyt_s0083.g51.t1 | XP_029212222.2 | RNA-binding protein 15-like [Acropora millepora] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
| Acropora digitifera | chr5Alt.g10293.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0122.g26.t1 | XP_015764893.1 | PREDICTED: putative RNA-binding protein 15 [Acropora digitifera] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
| Actinia equina | EGACTEQ4350045473-PA | XP_031570877.1 | RNA-binding protein 15-like [Actinia tenebrosa] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
| Acropora florida | aflo_s0155.g13.t1 | XP_015764893.1 | PREDICTED: putative RNA-binding protein 15 [Acropora digitifera] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
| Acropora gemmifera | agem_s0223.g17.t1 | XP_015764893.1 | PREDICTED: putative RNA-binding protein 15 [Acropora digitifera] | F6UA42 E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis OX=8 | JBrowse |
| Acropora gemmifera | agem_s0223.g17.t2 | XP_015764893.1 | PREDICTED: putative RNA-binding protein 15 [Acropora digitifera] | F6UA42 E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis OX=8 | JBrowse |
| Acropora hemprichii | Ahemp_014242-T1 | XP_015764893.1 | PREDICTED: putative RNA-binding protein 15 [Acropora digitifera] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
| Acropora hyacinthus | ahya_s0259.g22.t1 | XP_029212222.2 | RNA-binding protein 15-like [Acropora millepora] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g20757 | XP_020910042.1 | RNA-binding protein 15 [Exaiptasia diaphana] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
| Acropora intermedia | aint_s0026.g27.t1 | XP_015764893.1 | PREDICTED: putative RNA-binding protein 15 [Acropora digitifera] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
| Actinoscyphia liui | gene06107.t1 | XP_020910042.1 | RNA-binding protein 15 [Exaiptasia diaphana] | Q96T37 RNA-binding protein 15 OS=Homo sapiens OX=9606 GN=RBM15 PE=1 | JBrowse |
