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This orthogroup contains 263 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 263 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR47960 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | 213 / 263 | 81.0% | 92.2% of 231 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 213 / 263 | 81.0% | 92.2% of 231 | ≥80% support |
| Pfam | PF00270 | DEAD | 209 / 263 | 79.5% | 89.3% of 234 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 198 / 263 | 75.3% | 84.6% of 234 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 209 / 263 | 79.5% | 90.5% of 231 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 209 / 263 | 79.5% | 90.5% of 231 | ≥50% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 162 / 263 | 61.6% | 70.1% of 231 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora austera | ENSKKQP00000009655.1 | XP_029207705.2 | DEAD-box ATP-dependent RNA helicase 39-like isoform X3 [Acropora millepora] | Q56X76 DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thalia | JBrowse |
| Acropora austera | ENSKKQP00000009667.1 | XP_015753855.1 | PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 39-like [Acropora digitifera] | Q56X76 DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thalia | JBrowse |
| Acropora austera | ENSKKQP00000009677.1 | XP_029207704.2 | DEAD-box ATP-dependent RNA helicase 39-like isoform X1 [Acropora millepora] | Q56X76 DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thalia | JBrowse |
| Acropora austera | ENSKKQP00000009693.1 | XP_029207704.2 | DEAD-box ATP-dependent RNA helicase 39-like isoform X1 [Acropora millepora] | Q56X76 DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thalia | JBrowse |
