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Support counts the member genes carrying the term. % of genes is that count over all 3,368 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | VWA — von Willebrand factor type A domain | 2994 / 3,368 | 88.9% | 98.4% of 3,042 | ≥80% support |
| PANTHER | PTHR24020 | COLLAGEN ALPHA | 2442 / 3,368 | 72.5% | 83.0% of 2,943 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora awi | aawi_s0001.g253.t1 | XP_029197626.2 | collagen alpha-5(VI) chain-like [Acropora millepora] | H2A0N4 Protein PIF OS=Margaritifera margaritifera OX=102329 PE=1 SV | JBrowse |
| Acropora awi | aawi_s0001.g253.t2 | XP_015767328.1 | PREDICTED: collagen alpha-6(VI) chain-like [Acropora digitifera] | – | JBrowse |
| Acropora awi | aawi_s0001.g253.t3 | XP_029197626.2 | collagen alpha-5(VI) chain-like [Acropora millepora] | H2A0N4 Protein PIF OS=Margaritifera margaritifera OX=102329 PE=1 SV | JBrowse |
| Acropora awi | aawi_s0005.g90.t1 | XP_044175386.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC114969165 [Acropora millepora] | A8TX70 Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 | JBrowse |
| Acropora awi | aawi_s0005.g90.t2 | XP_044175386.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC114969165 [Acropora millepora] | A8TX70 Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 | JBrowse |
| Acropora awi | aawi_s0005.g90.t3 | XP_044175386.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC114969165 [Acropora millepora] | A8TX70 Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 | JBrowse |
| Acropora awi | aawi_s0005.g90.t4 | XP_044175386.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC114969165 [Acropora millepora] | A8TX70 Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 | JBrowse |
| Acropora awi | aawi_s0053.g3.t1 | XP_029187813.2 | collagen alpha-1(XX) chain-like [Acropora millepora] | – | JBrowse |
| Acropora awi | aawi_s0057.g69.t1 | XP_015765676.1 | PREDICTED: collagen alpha-1(XII) chain-like [Acropora digitifera] | E7FF10 von Willebrand factor A domain-containing protein 1 OS=Danio | JBrowse |
| Acropora awi | aawi_s0057.g72.t1 | XP_044175386.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC114969165 [Acropora millepora] | A6H584 Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Acropora awi | aawi_s0064.g72.t1 | XP_044179067.1 | uncharacterized protein LOC114969736 [Acropora millepora] | A2AX52 Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Acropora awi | aawi_s0064.g72.t2 | XP_044179067.1 | uncharacterized protein LOC114969736 [Acropora millepora] | A2AX52 Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Acropora awi | aawi_s0064.g73.t1 | XP_029205891.2 | uncharacterized protein LOC114969735 [Acropora millepora] | P15989 Collagen alpha-3(VI) chain OS=Gallus gallus OX=9031 GN=COL6A | JBrowse |
| Acropora awi | aawi_s0064.g74.t1 | XP_029205891.2 | uncharacterized protein LOC114969735 [Acropora millepora] | A2AX52 Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Acropora awi | aawi_s0323.g5.t1 | XP_015765676.1 | PREDICTED: collagen alpha-1(XII) chain-like [Acropora digitifera] | O15232 Matrilin-3 OS=Homo sapiens OX=9606 GN=MATN3 PE=1 SV=2 | JBrowse |
| Acropora awi | aawi_s0389.g1.t1 | XP_044179295.1 | uncharacterized protein LOC114977829 [Acropora millepora] | A6NMZ7 Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 | JBrowse |
| Acropora awi | aawi_s0389.g2.t1 | XP_044179295.1 | uncharacterized protein LOC114977829 [Acropora millepora] | Q8C6K9 Collagen alpha-6(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Acropora awi | aawi_s0389.g2.t2 | XP_044179295.1 | uncharacterized protein LOC114977829 [Acropora millepora] | A6NMZ7 Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 | JBrowse |
| Acropora awi | aawi_s0389.g2.t3 | XP_044179295.1 | uncharacterized protein LOC114977829 [Acropora millepora] | A6NMZ7 Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 | JBrowse |
| Acropora awi | aawi_s2345.g1.t1 | XP_015747433.1 | PREDICTED: agrin-like [Acropora digitifera] | A6NMZ7 Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 | JBrowse |
