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Support counts the member genes carrying the term. % of genes is that count over all 2,252 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 1928 / 2,252 | 85.6% | 97.9% of 1,970 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 1977 / 2,252 | 87.8% | 99.8% of 1,982 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 1923 / 2,252 | 85.4% | 97.0% of 1,982 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 1851 / 2,252 | 82.2% | 93.4% of 1,982 | ≥80% support |
| PANTHER | PTHR24329 | HOMEOBOX PROTEIN ARISTALESS | 1394 / 2,252 | 61.9% | 71.5% of 1,951 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 1765 / 2,252 | 78.4% | 89.1% of 1,982 | ≥50% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1404 / 2,252 | 62.3% | 70.8% of 1,982 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinia equina | EGACTEQ4350003852-PA | XP_031549447.1 | short stature homeobox protein-like [Actinia tenebrosa] | O35750 Short stature homeobox protein 2 (Fragment) OS=Rattus norveg | JBrowse |
| Actinia equina | EGACTEQ4350007050-PA | XP_031549447.1 | short stature homeobox protein-like [Actinia tenebrosa] | O35750 Short stature homeobox protein 2 (Fragment) OS=Rattus norveg | JBrowse |
| Actinia equina | EGACTEQ4350012696-PA | XP_031560467.1 | retinal homeobox protein Rx1-like [Actinia tenebrosa] | Q9I9D5 Retinal homeobox protein Rx1 OS=Psalidodon fasciatus OX=2233 | JBrowse |
| Actinia equina | EGACTEQ4350013441-PA | XP_031549106.1 | homeobox protein prophet of Pit-1-like [Actinia tenebrosa] | Q8MJI9 Homeobox protein prophet of Pit-1 OS=Bos taurus OX=9913 GN=P | JBrowse |
| Actinia equina | EGACTEQ4350018064-PA | XP_031567115.1 | homeobox protein 10-like [Actinia tenebrosa] | A6NJT0 Homeobox protein unc-4 homolog OS=Homo sapiens OX=9606 GN=UN | JBrowse |
| Actinia equina | EGACTEQ4350024250-PA | XP_031569266.1 | visual system homeobox 2-like [Actinia tenebrosa] | Q9IAL1 Visual system homeobox 2 OS=Gallus gallus OX=9031 GN=VSX2 PE | JBrowse |
| Actinia equina | EGACTEQ4350025748-PA | XP_031569022.1 | paired mesoderm homeobox protein 2-like [Actinia tenebrosa] | – | JBrowse |
| Actinia equina | EGACTEQ4350026828-PA | XP_031560466.1 | aristaless-related homeobox protein-like [Actinia tenebrosa] | O42115 Aristaless-related homeobox protein OS=Danio rerio OX=7955 G | JBrowse |
| Actinia equina | EGACTEQ4350029834-PA | XP_031567113.1 | homeobox protein unc-4 homolog isoform X2 [Actinia tenebrosa] | O08934 Homeobox protein unc-4 homolog OS=Mus musculus OX=10090 GN=U | JBrowse |
| Actinia equina | EGACTEQ4350034537-PA | XP_031549273.1 | retinal homeobox protein Rx1-like [Actinia tenebrosa] | O42115 Aristaless-related homeobox protein OS=Danio rerio OX=7955 G | JBrowse |
| Actinia equina | EGACTEQ4350034672-PA | XP_031572541.1 | ALX homeobox protein 1-like [Actinia tenebrosa] | Q1LVQ7 ALX homeobox protein 1 OS=Danio rerio OX=7955 GN=alx1 PE=2 S | JBrowse |
| Actinia equina | EGACTEQ4350038852-PA | XP_031562494.1 | retinal homeobox protein Rx1-like isoform X1 [Actinia tenebrosa] | Q96QS3 Homeobox protein ARX OS=Homo sapiens OX=9606 GN=ARX PE=1 SV= | JBrowse |
| Actinia equina | EGACTEQ4350043198-PA | XP_031562494.1 | retinal homeobox protein Rx1-like isoform X1 [Actinia tenebrosa] | Q96QS3 Homeobox protein ARX OS=Homo sapiens OX=9606 GN=ARX PE=1 SV= | JBrowse |
| Actinia equina | EGACTEQ4350051167-PA | XP_031573214.1 | homeobox protein goosecoid-like [Actinia tenebrosa] | P54366 Homeobox protein goosecoid OS=Drosophila melanogaster OX=722 | JBrowse |
| Actinia equina | EGACTEQ4350051435-PA | XP_031549273.1 | retinal homeobox protein Rx1-like [Actinia tenebrosa] | Q9PVY0 Retinal homeobox protein Rx1 OS=Gallus gallus OX=9031 GN=RX1 | JBrowse |
| Actinia equina | EGACTEQ4350054420-PA | XP_031567117.1 | homeobox protein unc-4 homolog [Actinia tenebrosa] | P29506 Homeobox protein unc-4 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Actinia equina | EGACTEQ4350055492-PA | XP_031569022.1 | paired mesoderm homeobox protein 2-like [Actinia tenebrosa] | Q9I9D5 Retinal homeobox protein Rx1 OS=Psalidodon fasciatus OX=2233 | JBrowse |
