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Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora florida | aflo_s0002.g147.t1 | XP_015773675.1 | PREDICTED: homeobox protein ceh-12-like [Acropora digitifera] | P50219 Motor neuron and pancreas homeobox protein 1 OS=Homo sapiens | JBrowse |
| Acropora florida | aflo_s0002.g162.t1 | XP_029207020.1 | homeobox protein ceh-13-like [Acropora millepora] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Acropora florida | aflo_s0002.g164.t1 | XP_029207033.1 | homeobox protein Hox-D4-like [Acropora millepora] | P31262 Homeobox protein Hox-C5 (Fragment) OS=Notophthalmus viridesc | JBrowse |
| Acropora florida | aflo_s0002.g165.t1 | XP_015773667.1 | PREDICTED: homeobox protein Hox-A5-like [Acropora digitifera] | P09019 Homeobox protein Hox-B5 (Fragment) OS=Xenopus laevis OX=8355 | JBrowse |
| Acropora florida | aflo_s0002.g170.t1 | XP_029208434.1 | homeobox protein Hox-D3a-like [Acropora millepora] | P09020 Homeobox protein Hox-C5 (Fragment) OS=Xenopus laevis OX=8355 | JBrowse |
| Acropora florida | aflo_s0002.g171.t1 | XP_015780820.1 | PREDICTED: homeobox protein Hox-A5-like [Acropora digitifera] | P52949 Homeobox protein Hox-A5 (Fragment) OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora florida | aflo_s0030.g16.t1 | XP_029198464.2 | homeobox protein MSX-3-like [Acropora millepora] | O43763 T-cell leukemia homeobox protein 2 OS=Homo sapiens OX=9606 G | JBrowse |
| Acropora florida | aflo_s0030.g18.t1 | XP_015773242.1 | PREDICTED: homeobox protein CHOX-7-like [Acropora digitifera] | O93366 T-cell leukemia homeobox protein 1 OS=Gallus gallus OX=9031 | JBrowse |
| Acropora florida | aflo_s0040.g48.t1 | XP_029198710.1 | homeobox protein Hox-D4b-like [Acropora millepora] | Q804S6 Homeobox protein EMX1 OS=Danio rerio OX=7955 GN=emx1 PE=2 SV | JBrowse |
| Acropora florida | aflo_s0040.g71.t1 | XP_015769946.1 | PREDICTED: homeobox protein not2-like isoform X1 [Acropora digitifera] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Acropora florida | aflo_s0040.g73.t1 | XP_015769948.1 | PREDICTED: homeobox protein Nkx-6.3-like [Acropora digitifera] | Q6GLB9 Homeobox protein EMX1 OS=Xenopus tropicalis OX=8364 GN=emx1 | JBrowse |
| Acropora florida | aflo_s0061.g47.t1 | XP_029195455.1 | barH-like 2 homeobox protein isoform X2 [Acropora millepora] | P56407 Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Acropora florida | aflo_s0061.g47.t2 | XP_029195454.1 | barH-like 2 homeobox protein isoform X1 [Acropora millepora] | P56407 Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Acropora florida | aflo_s0061.g72.t1 | XP_029195462.1 | homeobox protein HMX3-B-like [Acropora millepora] | Q90XN9 Homeobox protein HMX3-B OS=Oryzias latipes OX=8090 GN=hmx3b | JBrowse |
| Acropora florida | aflo_s0061.g73.t1 | XP_015768464.1 | PREDICTED: homeobox protein slou-like isoform X1 [Acropora digitifera] | Q75W95 NK1 transcription factor-related protein 1 OS=Danio rerio OX | JBrowse |
| Acropora florida | aflo_s0061.g79.t1 | XP_015768469.1 | PREDICTED: ventral anterior homeobox 1b-like [Acropora digitifera] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Acropora florida | aflo_s0081.g44.t1 | XP_029206381.1 | homeobox protein EMX1-like [Acropora millepora] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Acropora florida | aflo_s0081.g7.t1 | XP_022784688.1 | homeobox protein Hox-D4a-like [Stylophora pistillata] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Acropora florida | aflo_s0081.g81.t1 | XP_015757979.1 | PREDICTED: homeobox protein Nkx-6.2-like [Acropora digitifera] | Q9C056 Homeobox protein Nkx-6.2 OS=Homo sapiens OX=9606 GN=NKX6-2 P | JBrowse |
| Acropora florida | aflo_s0099.g18.t1 | XP_029198482.1 | homeobox protein vent1-like [Acropora millepora] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
