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Support counts the member genes carrying the term. % of genes is that count over all 433 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 394 / 433 | 91.0% | 99.5% of 396 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 394 / 433 | 91.0% | 99.5% of 396 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 381 / 433 | 88.0% | 96.2% of 396 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 364 / 433 | 84.1% | 91.9% of 396 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 360 / 433 | 83.1% | 90.9% of 396 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 360 / 433 | 83.1% | 90.9% of 396 | ≥80% support |
| PANTHER | PTHR24340 | HOMEOBOX PROTEIN NKX | 299 / 433 | 69.1% | 76.5% of 391 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 307 / 433 | 70.9% | 77.5% of 396 | ≥50% support |
| GO | GO:0030154 Biological Process | cell differentiation | 300 / 433 | 69.3% | 75.8% of 396 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora gemmifera | agem_s0056.g39.t1 | XP_015772891.1 | PREDICTED: homeobox protein HMX2-like [Acropora digitifera] | A2RU54 Homeobox protein HMX2 OS=Homo sapiens OX=9606 GN=HMX2 PE=1 S | JBrowse |
| Acropora gemmifera | agem_s0056.g40.t1 | XP_029214154.2 | homeobox protein GBX-2-like [Acropora millepora] | Q26603 Homeobox protein SMOX-4 (Fragment) OS=Schistosoma mansoni OX | JBrowse |
| Acropora gemmifera | agem_s0056.g41.t1 | XP_015772887.1 | PREDICTED: homeobox protein GBX-2-like [Acropora digitifera] | Q26603 Homeobox protein SMOX-4 (Fragment) OS=Schistosoma mansoni OX | JBrowse |
| Acropora gemmifera | agem_s0056.g42.t1 | XP_029214156.1 | homeobox protein vent1-like [Acropora millepora] | Q24256 Homeobox protein B-H2 OS=Drosophila melanogaster OX=7227 GN= | JBrowse |
