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This orthogroup contains 223 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 223 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR19431 | 60S RIBOSOMAL PROTEIN L4 | 199 / 223 | 89.2% | 100.0% of 199 | ≥80% support |
| Pfam | PF00573 | Ribosomal_L4 — Ribosomal protein L4/L1 family | 193 / 223 | 86.6% | 97.0% of 199 | ≥80% support |
| Pfam | PF14374 | Ribos_L4_asso_C — 60S ribosomal protein L4 C-terminal domain | 193 / 223 | 86.6% | 97.0% of 199 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 199 / 223 | 89.2% | 100.0% of 199 | ≥80% support |
| GO | GO:0003735 Molecular Function | structural constituent of ribosome | 199 / 223 | 89.2% | 100.0% of 199 | ≥80% support |
| GO | GO:0022625 Cellular Component | cytosolic large ribosomal subunit | 199 / 223 | 89.2% | 100.0% of 199 | ≥80% support |
| GO | GO:0005840 Cellular Component | ribosome | 195 / 223 | 87.4% | 98.0% of 199 | ≥80% support |
| GO | GO:0006412 Biological Process | translation | 195 / 223 | 87.4% | 98.0% of 199 | ≥80% support |
| KEGG | K02930 | RP-L4e, RPL4 — Ribosome | 169 / 223 | 75.8% | 100.0% of 169 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora gemmifera | agem_s0028.g148.t1 | XP_029189128.1 | 60S ribosomal protein L4-A-like [Acropora millepora] | P08429 Large ribosomal subunit protein uL4A OS=Xenopus laevis OX=83 | JBrowse |
