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1 sequences in this family share a gene identifier with another member, so the 2,804 sequences above are 2,803 distinct genes — none is counted twice.
Support counts the member genes carrying the term. % of genes is that count over all 2,803 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00028 | Cadherin | 2322 / 2,803 | 82.8% | 97.6% of 2,380 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 2396 / 2,803 | 85.5% | 98.8% of 2,426 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 2369 / 2,803 | 84.5% | 97.7% of 2,426 | ≥80% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 2365 / 2,803 | 84.4% | 97.5% of 2,426 | ≥80% support |
| GO | GO:0007155 Biological Process | cell adhesion | 2247 / 2,803 | 80.2% | 92.6% of 2,426 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 2228 / 2,803 | 79.5% | 91.8% of 2,426 | ≥50% support |
| GO | GO:0098609 Biological Process | cell-cell adhesion | 1660 / 2,803 | 59.2% | 68.4% of 2,426 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora hemprichii | Ahemp_002006-T1 | XP_029204274.2 | cadherin-related tumor suppressor-like [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora hemprichii | Ahemp_002007-T1 | XP_029204274.2 | cadherin-related tumor suppressor-like [Acropora millepora] | – | JBrowse |
| Acropora hemprichii | Ahemp_004151-T1 | XP_044181720.1 | LOW QUALITY PROTEIN: cadherin-23-like [Acropora millepora] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Acropora hemprichii | Ahemp_006144-T1 | XP_044176312.1 | protocadherin Fat 1-like [Acropora millepora] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
| Acropora hemprichii | Ahemp_010020-T1 | XP_044168013.1 | protocadherin-like wing polarity protein stan, partial [Acropora millepora] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
| Acropora hemprichii | Ahemp_010022-T1 | XP_044168013.1 | protocadherin-like wing polarity protein stan, partial [Acropora millepora] | Q9V5N8 Protocadherin-like wing polarity protein stan OS=Drosophila | JBrowse |
| Acropora hemprichii | Ahemp_010023-T1 | XP_044175394.1 | cadherin-23-like [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora hemprichii | Ahemp_012008-T1 | XP_029179574.2 | uncharacterized protein LOC114947057, partial [Acropora millepora] | Q8R508 Protocadherin Fat 3 OS=Rattus norvegicus OX=10116 GN=Fat3 PE | JBrowse |
| Acropora hemprichii | Ahemp_017113-T1 | XP_029199018.2 | protocadherin Fat 4-like [Acropora millepora] | Q24292 Protein dachsous OS=Drosophila melanogaster OX=7227 GN=ds PE | JBrowse |
| Acropora hemprichii | Ahemp_017581-T1 | XP_044176472.1 | protocadherin Fat 4-like [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora hemprichii | Ahemp_023302-T1 | XP_044181720.1 | LOW QUALITY PROTEIN: cadherin-23-like [Acropora millepora] | P58365 Cadherin-23 OS=Rattus norvegicus OX=10116 GN=Cdh23 PE=2 SV=1 | JBrowse |
| Acropora hemprichii | Ahemp_025162-T1 | XP_015749466.1 | PREDICTED: cadherin-10-like [Acropora digitifera] | Q91ZI0 Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculu | JBrowse |
| Acropora hemprichii | Ahemp_027220-T1 | XP_044175394.1 | cadherin-23-like [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora hemprichii | Ahemp_027223-T1 | XP_044175394.1 | cadherin-23-like [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora hemprichii | Ahemp_027224-T1 | XP_044175394.1 | cadherin-23-like [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora hemprichii | Ahemp_027761-T1 | XP_015767064.1 | PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora digitifera] | O15146 Muscle, skeletal receptor tyrosine-protein kinase OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_029067-T1 | XP_044176312.1 | protocadherin Fat 1-like [Acropora millepora] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
| Acropora hemprichii | Ahemp_029919-T1 | XP_015767064.1 | PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Acropora digitifera] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora hemprichii | Ahemp_031033-T2 | XP_015747591.1 | PREDICTED: cadherin-23-like [Acropora digitifera] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
