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Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g10580 | XP_020917512.1 | pancreas/duodenum homeobox protein 1 [Exaiptasia diaphana] | P10179 Homeobox protein HB4 (Fragment) OS=Tripneustes gratilla OX=7 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g10586 | XP_020917531.1 | homeobox protein Hox-A5a [Exaiptasia diaphana] | P10179 Homeobox protein HB4 (Fragment) OS=Tripneustes gratilla OX=7 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g10587 | XP_020917496.1 | GS homeobox 1 [Exaiptasia diaphana] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g11821 | XP_031567367.1 | homeobox protein BarH-like 1 [Actinia tenebrosa] | Q9UMQ3 Homeobox protein BarH-like 2 OS=Homo sapiens OX=9606 GN=BARX | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g12066 | XP_020911517.1 | homeobox protein HMX3-A [Exaiptasia diaphana] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g12067 | XP_020911512.2 | homeobox protein pnx [Exaiptasia diaphana] | Q9BZE3 BarH-like 1 homeobox protein OS=Homo sapiens OX=9606 GN=BARH | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g12086 | XP_020909552.1 | barH-like 1 homeobox protein [Exaiptasia diaphana] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g12133 | XP_020911517.1 | homeobox protein HMX3-A [Exaiptasia diaphana] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g12134 | XP_020911512.2 | homeobox protein pnx [Exaiptasia diaphana] | Q9BZE3 BarH-like 1 homeobox protein OS=Homo sapiens OX=9606 GN=BARH | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g12157 | XP_020909552.1 | barH-like 1 homeobox protein [Exaiptasia diaphana] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g1289 | XP_020898700.1 | homeobox protein Hox-D3 isoform X1 [Exaiptasia diaphana] | P14840 Homeobox protein Hox-B4 OS=Gallus gallus OX=9031 GN=HOXB4 PE | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g1290 | KXJ15325.1 | Homeobox protein Hox-B4a [Exaiptasia diaphana] | P14838 Homeobox protein Hox-B5 (Fragment) OS=Gallus gallus OX=9031 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g1291 | XP_020898707.2 | homeobox protein Hox-B4 [Exaiptasia diaphana] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g1356 | XP_020905126.1 | homeobox protein Hox-D3-like [Exaiptasia diaphana] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g16335 | XP_020897531.1 | homeobox protein vent1B [Exaiptasia diaphana] | Q6F2E2 Homeobox protein vex1 OS=Xenopus tropicalis OX=8364 GN=vex1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g20702 | XP_020917496.1 | GS homeobox 1 [Exaiptasia diaphana] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g20703 | XP_020917531.1 | homeobox protein Hox-A5a [Exaiptasia diaphana] | P10179 Homeobox protein HB4 (Fragment) OS=Tripneustes gratilla OX=7 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g20709 | XP_020917512.1 | pancreas/duodenum homeobox protein 1 [Exaiptasia diaphana] | P10179 Homeobox protein HB4 (Fragment) OS=Tripneustes gratilla OX=7 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g26081 | XP_031554273.1 | homeobox protein Hox-B4-like isoform X1 [Actinia tenebrosa] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g26267 | XP_020898175.1 | ventral anterior homeobox 2b [Exaiptasia diaphana] | – | JBrowse |
