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Support counts the member genes carrying the term. % of genes is that count over all 2,575 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | HLH — Helix-loop-helix DNA-binding domain | 2335 / 2,575 | 90.7% | 99.9% of 2,337 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 2337 / 2,575 | 90.8% | 100.0% of 2,338 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 2321 / 2,575 | 90.1% | 99.3% of 2,338 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 2156 / 2,575 | 83.7% | 92.2% of 2,338 | ≥80% support |
| PANTHER | PTHR23349 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST | 1851 / 2,575 | 71.9% | 79.7% of 2,324 | ≥50% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1851 / 2,575 | 71.9% | 79.2% of 2,338 | ≥50% support |
| GO | GO:0032502 Biological Process | developmental process | 1851 / 2,575 | 71.9% | 79.2% of 2,338 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g1712 | XP_031572700.1 | twist-related protein-like [Actinia tenebrosa] | P13903 Twist-related protein OS=Xenopus laevis OX=8355 GN=twist1 PE | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g1713 | XP_020892182.1 | transcription factor 15 [Exaiptasia diaphana] | P79782 Transcription factor 15 OS=Gallus gallus OX=9031 GN=TCF15 PE | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g17141 | KXJ16510.1 | Protein atonal-like 8 [Exaiptasia diaphana] | Q96SQ7 Transcription factor ATOH8 OS=Homo sapiens OX=9606 GN=ATOH8 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g1715 | XP_020892151.1 | transcription factor 15 [Exaiptasia diaphana] | Q6QHK4 Factor in the germline alpha OS=Homo sapiens OX=9606 GN=FIGL | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g1716 | XP_020892262.1 | protein atonal homolog 7-A-like [Exaiptasia diaphana] | – | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g1718 | XP_020892248.1 | protein atonal homolog 1 [Exaiptasia diaphana] | Q15784 Neurogenic differentiation factor 2 OS=Homo sapiens OX=9606 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g20640 | XP_031550044.1 | heart- and neural crest derivatives-expressed protein 2-like [Actinia tenebrosa] | Q90690 Heart- and neural crest derivatives-expressed protein 2 OS=G | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g21321 | XP_020896299.1 | twist-related protein 2-like [Exaiptasia diaphana] | P24899 T-cell acute lymphocytic leukemia protein 1 homolog OS=Gallu | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g21322 | KXJ16711.1 | T-cell acute lymphocytic leukemia protein 1-like [Exaiptasia diaphana] | Q90YI8 T-cell acute lymphocytic leukemia protein 1 OS=Takifugu rubr | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g21323 | XP_020896293.1 | T-cell acute lymphocytic leukemia protein 1 homolog [Exaiptasia diaphana] | Q66HH3 Protein lyl-1 OS=Rattus norvegicus OX=10116 GN=Lyl1 PE=2 SV= | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g29540 | XP_028516865.1 | achaete-scute homolog 1a-like [Exaiptasia diaphana] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g29575 | XP_020909828.1 | achaete-scute homolog 2 [Exaiptasia diaphana] | Q06234 Achaete-scute homolog 1 OS=Xenopus laevis OX=8355 GN=ascl1 P | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g29586 | XP_020907878.1 | helix-loop-helix protein 2 [Exaiptasia diaphana] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g29743 | XP_020911354.1 | achaete-scute homolog 4 [Exaiptasia diaphana] | Q6XD76 Achaete-scute homolog 4 OS=Homo sapiens OX=9606 GN=ASCL4 PE= | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g31 | XP_020917318.1 | pancreas transcription factor 1 subunit alpha [Exaiptasia diaphana] | Q7ZSX3 Pancreas transcription factor 1 subunit alpha OS=Danio rerio | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g32 | XP_031560876.1 | pancreas transcription factor 1 subunit alpha-like [Actinia tenebrosa] | Q9QX98 Pancreas transcription factor 1 subunit alpha OS=Mus musculu | JBrowse |
