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Support counts the member genes carrying the term. % of genes is that count over all 2,277 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00058 | Ldl_recept_b — Low-density lipoprotein receptor repeat class B | 1757 / 2,277 | 77.2% | 92.7% of 1,895 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g12771 | KAJ7370892.1 | Low-density lipoprotein receptor- protein 6 [Desmophyllum pertusum] | – | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g12774 | XP_031569692.1 | low-density lipoprotein receptor-related protein 4-like [Actinia tenebrosa] | P98157 Low-density lipoprotein receptor-related protein 1 OS=Gallus | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g12775 | XP_031569692.1 | low-density lipoprotein receptor-related protein 4-like [Actinia tenebrosa] | – | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g12781 | XP_031569692.1 | low-density lipoprotein receptor-related protein 4-like [Actinia tenebrosa] | P98157 Low-density lipoprotein receptor-related protein 1 OS=Gallus | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g19046 | XP_028513305.1 | low-density lipoprotein receptor-related protein 8-like [Exaiptasia diaphana] | A2ARV4 Low-density lipoprotein receptor-related protein 2 OS=Mus mu | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g21066 | XP_020911423.1 | very low-density lipoprotein receptor isoform X1 [Exaiptasia diaphana] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g21284 | XP_028514163.1 | receptor-type tyrosine-protein phosphatase delta [Exaiptasia diaphana] | P35952 Low-density lipoprotein receptor OS=Rattus norvegicus OX=101 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g21290 | XP_031564897.1 | very low-density lipoprotein receptor-like isoform X5 [Actinia tenebrosa] | A2ARV4 Low-density lipoprotein receptor-related protein 2 OS=Mus mu | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g29215 | XP_020901735.1 | low-density lipoprotein receptor [Exaiptasia diaphana] | O75096 Low-density lipoprotein receptor-related protein 4 OS=Homo s | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g29216 | XP_031567063.1 | low-density lipoprotein receptor-related protein 4-like [Actinia tenebrosa] | Q28832 Low-density lipoprotein receptor (Fragment) OS=Sus scrofa OX | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g5092 | XP_028518194.1 | low-density lipoprotein receptor-related protein 6, partial [Exaiptasia diaphana] | O75581 Low-density lipoprotein receptor-related protein 6 OS=Homo s | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g7981 | XP_031564898.1 | very low-density lipoprotein receptor-like isoform X6 [Actinia tenebrosa] | P98164 Low-density lipoprotein receptor-related protein 2 OS=Homo s | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g8697 | XP_031564898.1 | very low-density lipoprotein receptor-like isoform X6 [Actinia tenebrosa] | Q9QYP1 Low-density lipoprotein receptor-related protein 4 OS=Rattus | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g8698 | XP_031564898.1 | very low-density lipoprotein receptor-like isoform X6 [Actinia tenebrosa] | P35952 Low-density lipoprotein receptor OS=Rattus norvegicus OX=101 | JBrowse |
