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Support counts the member genes carrying the term. % of genes is that count over all 1,386 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10796 | PATCHED-RELATED | 1263 / 1,386 | 91.1% | 99.5% of 1,269 | ≥80% support |
| Pfam | PF02460 | Patched | 1238 / 1,386 | 89.3% | 99.8% of 1,241 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 1269 / 1,386 | 91.6% | 100.0% of 1,269 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g14102 | XP_020901808.1 | patched domain-containing protein 3 isoform X1 [Exaiptasia diaphana] | M0R3Q7 Patched domain-containing protein 3 OS=Rattus norvegicus OX= | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g5075 | XP_020904025.1 | NPC intracellular cholesterol transporter 1 [Exaiptasia diaphana] | Q0EEE2 Patched domain-containing protein 3 OS=Mus musculus OX=10090 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g5126 | XP_031567431.1 | patched domain-containing protein 3-like [Actinia tenebrosa] | O15131 Importin subunit alpha-6 OS=Homo sapiens OX=9606 GN=KPNA5 PE | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g5312 | XP_031567431.1 | patched domain-containing protein 3-like [Actinia tenebrosa] | Q0EEE2 Patched domain-containing protein 3 OS=Mus musculus OX=10090 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g5313 | KXJ22187.1 | Patched domain-containing protein 3 [Exaiptasia diaphana] | Q0EEE2 Patched domain-containing protein 3 OS=Mus musculus OX=10090 | JBrowse |
