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Support counts the member genes carrying the term. % of genes is that count over all 291 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11134 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER | 241 / 291 | 82.8% | 99.6% of 242 | ≥80% support |
| Pfam | PF01602 | Adaptin_N — Adaptin N terminal region | 233 / 291 | 80.1% | 95.5% of 244 | ≥80% support |
| GO | GO:0016192 Biological Process | vesicle-mediated transport | 241 / 291 | 82.8% | 99.6% of 242 | ≥80% support |
| GO | GO:0006886 Biological Process | intracellular protein transport | 234 / 291 | 80.4% | 96.7% of 242 | ≥80% support |
| GO | GO:0030117 Cellular Component | membrane coat | 233 / 291 | 80.1% | 96.3% of 242 | ≥80% support |
| Pfam | PF14796 | AP3B1_C — Clathrin-adaptor complex-3 beta-1 subunit C-terminal | 191 / 291 | 65.6% | 78.3% of 244 | ≥50% support |
| GO | GO:0030123 Cellular Component | AP-3 adaptor complex | 167 / 291 | 57.4% | 69.0% of 242 | ≥50% support |
| KEGG | K12397 | AP3B — Membrane trafficking | 179 / 291 | 61.5% | 96.8% of 185 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g3982 | XP_020914347.1 | AP-3 complex subunit beta-2 [Exaiptasia diaphana] | Q7YRF1 AP-3 complex subunit beta-1 OS=Canis lupus familiaris OX=961 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g3987 | XP_020914347.1 | AP-3 complex subunit beta-2 [Exaiptasia diaphana] | O00203 AP-3 complex subunit beta-1 OS=Homo sapiens OX=9606 GN=AP3B1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g3988 | XP_020914347.1 | AP-3 complex subunit beta-2 [Exaiptasia diaphana] | Q13367 AP-3 complex subunit beta-2 OS=Homo sapiens OX=9606 GN=AP3B2 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g4028 | XP_020914347.1 | AP-3 complex subunit beta-2 [Exaiptasia diaphana] | Q13367 AP-3 complex subunit beta-2 OS=Homo sapiens OX=9606 GN=AP3B2 | JBrowse |
