← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 2,277 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00058 | Ldl_recept_b — Low-density lipoprotein receptor repeat class B | 1757 / 2,277 | 77.2% | 92.7% of 1,895 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora intermedia | aint_s0051.g16.t1 | XP_029190659.2 | very low-density lipoprotein receptor-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora intermedia | aint_s0051.g16.t2 | XP_029190659.2 | very low-density lipoprotein receptor-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora intermedia | aint_s0073.g49.t1 | XP_044163959.1 | low-density lipoprotein receptor-related protein 8-like [Acropora millepora] | Q07954 Prolow-density lipoprotein receptor-related protein 1 OS=Hom | JBrowse |
| Acropora intermedia | aint_s0313.g10.t1 | XP_044166215.1 | uncharacterized protein LOC114950433 [Acropora millepora] | O75581 Low-density lipoprotein receptor-related protein 6 OS=Homo s | JBrowse |
| Acropora intermedia | aint_s0313.g11.t1 | XP_044166215.1 | uncharacterized protein LOC114950433 [Acropora millepora] | O75096 Low-density lipoprotein receptor-related protein 4 OS=Homo s | JBrowse |
| Acropora intermedia | aint_s0321.g8.t1 | XP_029205283.2 | uncharacterized protein LOC114969147 isoform X2 [Acropora millepora] | Q91VN0 Low-density lipoprotein receptor-related protein 5 OS=Mus mu | JBrowse |
| Acropora intermedia | aint_s0697.g4.t1 | XP_029198189.2 | low-density lipoprotein receptor-related protein 4-like isoform X3 [Acropora millepora] | P98164 Low-density lipoprotein receptor-related protein 2 OS=Homo s | JBrowse |
