In this module, the detailed information of all genes in this specific family was shown as follows.
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinoscyphia liui | gene05228.t1 | XP_018558533.1 | LOW QUALITY PROTEIN: protocadherin Fat 4 [Lates calcarifer] | P33450 Cadherin-related tumor suppressor OS=Drosophila melanogaster | JBrowse |
| Actinoscyphia liui | gene05992.t1 | XP_023226215.1 | LOW QUALITY PROTEIN: protein dachsous-like [Centruroides sculpturatus] | E9PVD3 Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1 | JBrowse |
| Actinoscyphia liui | gene08374.t1 | XP_048580320.1 | uncharacterized protein LOC116612238 isoform X1 [Nematostella vectensis] | Q9HCU4 Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapien | JBrowse |
| Actinoscyphia liui | gene21067.t1 | XP_023184135.1 | protocadherin Fat 4 isoform X1 [Xiphophorus maculatus] | Q9H251 Cadherin-23 OS=Homo sapiens OX=9606 GN=CDH23 PE=1 SV=2 | JBrowse |
| Actinoscyphia liui | gene21630.t1 | AUG84445.1 | fat [Platynereis dumerilii] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
| Actinoscyphia liui | gene21631.t1 | XP_048590536.1 | cadherin-23 isoform X3 [Nematostella vectensis] | Q9R0M0 Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculu | JBrowse |
| Actinoscyphia liui | gene21632.t1 | XP_022784236.1 | protocadherin Fat 4-like [Stylophora pistillata] | Q99PF4 Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2 | JBrowse |
| Actinoscyphia liui | gene23960.t1 | XP_019635319.1 | PREDICTED: cadherin-23-like [Branchiostoma belcheri] | Q99PF4 Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2 | JBrowse |
| Actinoscyphia liui | gene23960.t2 | XP_019635319.1 | PREDICTED: cadherin-23-like [Branchiostoma belcheri] | Q99PF4 Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2 | JBrowse |
| Actinoscyphia liui | gene24696.t1 | XP_052781278.1 | protocadherin Fat 4-like isoform X1 [Mya arenaria] | Q8R508 Protocadherin Fat 3 OS=Rattus norvegicus OX=10116 GN=Fat3 PE | JBrowse |
| Actinoscyphia liui | gene24776.t1 | CAB4001436.1 | Protocadherin Fat 4 [Paramuricea clavata] | Q99PF4 Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2 | JBrowse |
