← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 2,277 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00058 | Ldl_recept_b — Low-density lipoprotein receptor repeat class B | 1757 / 2,277 | 77.2% | 92.7% of 1,895 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinoscyphia liui | gene08557.t1 | XP_031557570.1 | low-density lipoprotein receptor 1-like [Actinia tenebrosa] | P98158 Low-density lipoprotein receptor-related protein 2 OS=Rattus | JBrowse |
| Actinoscyphia liui | gene14403.t1 | XP_031569692.1 | low-density lipoprotein receptor-related protein 4-like [Actinia tenebrosa] | – | JBrowse |
| Actinoscyphia liui | gene14405.t1 | XP_031569692.1 | low-density lipoprotein receptor-related protein 4-like [Actinia tenebrosa] | O88572 Low-density lipoprotein receptor-related protein 6 OS=Mus mu | JBrowse |
| Actinoscyphia liui | gene14668.t1 | XP_020906632.1 | uncharacterized protein LOC110244751 isoform X3 [Exaiptasia diaphana] | – | JBrowse |
| Actinoscyphia liui | gene15340.t1 | XP_031555060.1 | uncharacterized protein LOC116291965, partial [Actinia tenebrosa] | Q07954 Prolow-density lipoprotein receptor-related protein 1 OS=Hom | JBrowse |
| Actinoscyphia liui | gene15340.t2 | XP_031555060.1 | uncharacterized protein LOC116291965, partial [Actinia tenebrosa] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Actinoscyphia liui | gene22982.t1 | XP_031564896.1 | very low-density lipoprotein receptor-like isoform X4 [Actinia tenebrosa] | Q9NZR2 Low-density lipoprotein receptor-related protein 1B OS=Homo | JBrowse |
| Actinoscyphia liui | gene22986.t1 | XP_031564897.1 | very low-density lipoprotein receptor-like isoform X5 [Actinia tenebrosa] | P35952 Low-density lipoprotein receptor OS=Rattus norvegicus OX=101 | JBrowse |
| Actinoscyphia liui | gene23588.t1 | XP_020911424.1 | low-density lipoprotein receptor-related protein 4 isoform X2 [Exaiptasia diaphana] | P98158 Low-density lipoprotein receptor-related protein 2 OS=Rattus | JBrowse |
| Actinoscyphia liui | gene23588.t2 | XP_020911423.1 | very low-density lipoprotein receptor isoform X1 [Exaiptasia diaphana] | P35951 Low-density lipoprotein receptor OS=Mus musculus OX=10090 GN | JBrowse |
| Actinoscyphia liui | gene27572.t1 | XP_020901735.1 | low-density lipoprotein receptor [Exaiptasia diaphana] | Q28832 Low-density lipoprotein receptor (Fragment) OS=Sus scrofa OX | JBrowse |
