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This orthogroup contains 1,569 genes from 147 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,569 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11467 | HISTONE H1 | 1302 / 1,569 | 83.0% | 99.1% of 1,314 | ≥80% support |
| Pfam | PF00538 | Linker_histone — linker histone H1 and H5 family | 1421 / 1,569 | 90.6% | 100.0% of 1,421 | ≥80% support |
| GO | GO:0000786 Cellular Component | nucleosome | 1430 / 1,569 | 91.1% | 100.0% of 1,430 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 1430 / 1,569 | 91.1% | 100.0% of 1,430 | ≥80% support |
| GO | GO:0006334 Biological Process | nucleosome assembly | 1430 / 1,569 | 91.1% | 100.0% of 1,430 | ≥80% support |
| GO | GO:0030527 Molecular Function | structural constituent of chromatin | 1406 / 1,569 | 89.6% | 98.3% of 1,430 | ≥80% support |
| GO | GO:0003690 Molecular Function | double-stranded DNA binding | 1302 / 1,569 | 83.0% | 91.1% of 1,430 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 1302 / 1,569 | 83.0% | 91.1% of 1,430 | ≥80% support |
| GO | GO:0030261 Biological Process | chromosome condensation | 1302 / 1,569 | 83.0% | 91.1% of 1,430 | ≥80% support |
| GO | GO:0031492 Molecular Function | nucleosomal DNA binding | 1302 / 1,569 | 83.0% | 91.1% of 1,430 | ≥80% support |
| GO | GO:0045910 Biological Process | negative regulation of DNA recombination | 1302 / 1,569 | 83.0% | 91.1% of 1,430 | ≥80% support |
| KEGG | K11275 | H1_5 — Chromosome and associated proteins | 1384 / 1,569 | 88.2% | 99.9% of 1,386 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinoscyphia liui | gene01259.t1 | XP_048575984.1 | late histone H1-like [Nematostella vectensis] | P22844 Histone H1.0-B OS=Xenopus laevis OX=8355 GN=h1-0-b PE=1 SV=1 | JBrowse |
| Actinoscyphia liui | gene01308.t1 | XP_048575984.1 | late histone H1-like [Nematostella vectensis] | P22844 Histone H1.0-B OS=Xenopus laevis OX=8355 GN=h1-0-b PE=1 SV=1 | JBrowse |
| Actinoscyphia liui | gene01310.t1 | XP_048575984.1 | late histone H1-like [Nematostella vectensis] | P22844 Histone H1.0-B OS=Xenopus laevis OX=8355 GN=h1-0-b PE=1 SV=1 | JBrowse |
| Actinoscyphia liui | gene01762.t1 | XP_031558129.1 | late histone H1-like [Actinia tenebrosa] | P07796 Histone H1-gamma, late OS=Strongylocentrotus purpuratus OX=7 | JBrowse |
| Actinoscyphia liui | gene02192.t1 | EDO48286.1 | predicted protein [Nematostella vectensis] | P15870 Histone H1-delta OS=Strongylocentrotus purpuratus OX=7668 PE | JBrowse |
| Actinoscyphia liui | gene02952.t1 | XP_028516074.1 | histone H1-gamma, late-like [Exaiptasia diaphana] | P15870 Histone H1-delta OS=Strongylocentrotus purpuratus OX=7668 PE | JBrowse |
| Actinoscyphia liui | gene03052.t1 | XP_031558129.1 | late histone H1-like [Actinia tenebrosa] | P07796 Histone H1-gamma, late OS=Strongylocentrotus purpuratus OX=7 | JBrowse |
| Actinoscyphia liui | gene11050.t1 | XP_031567118.1 | histone H1-delta-like [Actinia tenebrosa] | P15870 Histone H1-delta OS=Strongylocentrotus purpuratus OX=7668 PE | JBrowse |
| Actinoscyphia liui | gene20315.t1 | XP_020901922.1 | histone H1.0 [Exaiptasia diaphana] | Q0IIJ2 Histone H1.0 OS=Bos taurus OX=9913 GN=H1-0 PE=2 SV=3 | JBrowse |
| Actinoscyphia liui | gene24288.t1 | XP_031555760.1 | histone H1.0-like [Actinia tenebrosa] | P15870 Histone H1-delta OS=Strongylocentrotus purpuratus OX=7668 PE | JBrowse |
| Actinoscyphia liui | gene26740.t1 | XP_031555760.1 | histone H1.0-like [Actinia tenebrosa] | Q5NVN9 Histone H1.0 OS=Pongo abelii OX=9601 GN=H1-0 PE=2 SV=3 | JBrowse |
| Actinoscyphia liui | gene26741.t1 | XP_048575984.1 | late histone H1-like [Nematostella vectensis] | P15870 Histone H1-delta OS=Strongylocentrotus purpuratus OX=7668 PE | JBrowse |
| Actinoscyphia liui | gene28130.t1 | XP_020893621.1 | histone H1-delta-like [Exaiptasia diaphana] | P02258 Histone H5 OS=Anser anser anser OX=8844 PE=1 SV=1 | JBrowse |
| Actinoscyphia liui | gene28131.t1 | XP_020893573.1 | histone H1-delta [Exaiptasia diaphana] | P15870 Histone H1-delta OS=Strongylocentrotus purpuratus OX=7668 PE | JBrowse |
| Actinoscyphia liui | gene28133.t1 | XP_048575985.1 | histone H1-delta-like [Nematostella vectensis] | P15870 Histone H1-delta OS=Strongylocentrotus purpuratus OX=7668 PE | JBrowse |
| Actinoscyphia liui | gene28198.t1 | EDO48286.1 | predicted protein [Nematostella vectensis] | P15870 Histone H1-delta OS=Strongylocentrotus purpuratus OX=7668 PE | JBrowse |
| Actinoscyphia liui | gene28200.t1 | XP_048575985.1 | histone H1-delta-like [Nematostella vectensis] | P15870 Histone H1-delta OS=Strongylocentrotus purpuratus OX=7668 PE | JBrowse |
| Actinoscyphia liui | gene28598.t1 | XP_020893621.1 | histone H1-delta-like [Exaiptasia diaphana] | Q6NVM0 Histone H1.0 OS=Xenopus tropicalis OX=8364 GN=h1-0 PE=2 SV=1 | JBrowse |
| Actinoscyphia liui | gene28797.t1 | EDO48286.1 | predicted protein [Nematostella vectensis] | Q5NVN9 Histone H1.0 OS=Pongo abelii OX=9601 GN=H1-0 PE=2 SV=3 | JBrowse |
