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Support counts the member genes carrying the term. % of genes is that count over all 1,377 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF12906 | RINGv — RING-variant domain | 1216 / 1,377 | 88.3% | 99.7% of 1,220 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 1216 / 1,377 | 88.3% | 99.2% of 1,226 | ≥80% support |
| PANTHER | PTHR46065 | E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER | 1023 / 1,377 | 74.3% | 83.7% of 1,223 | ≥50% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 906 / 1,377 | 65.8% | 73.9% of 1,226 | ≥50% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 906 / 1,377 | 65.8% | 73.9% of 1,226 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinoscyphia liui | gene02949.t1 | XP_020904904.1 | E3 ubiquitin-protein ligase MARCH3-like [Exaiptasia diaphana] | Q68FA7 E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus tropicalis OX | JBrowse |
| Actinoscyphia liui | gene04004.t2 | XP_028519556.1 | E3 ubiquitin-protein ligase MARCH2-like [Exaiptasia diaphana] | A0JN69 E3 ubiquitin-protein ligase MARCHF3 OS=Bos taurus OX=9913 GN | JBrowse |
| Actinoscyphia liui | gene04089.t2 | XP_028519556.1 | E3 ubiquitin-protein ligase MARCH2-like [Exaiptasia diaphana] | A0JN69 E3 ubiquitin-protein ligase MARCHF3 OS=Bos taurus OX=9913 GN | JBrowse |
| Actinoscyphia liui | gene06098.t1 | XP_020910041.1 | E3 ubiquitin-protein ligase MARCH8 [Exaiptasia diaphana] | Q9DBD2 E3 ubiquitin-protein ligase MARCHF8 OS=Mus musculus OX=10090 | JBrowse |
| Actinoscyphia liui | gene06098.t2 | XP_020910041.1 | E3 ubiquitin-protein ligase MARCH8 [Exaiptasia diaphana] | Q9DBD2 E3 ubiquitin-protein ligase MARCHF8 OS=Mus musculus OX=10090 | JBrowse |
| Actinoscyphia liui | gene11759.t1 | XP_020898788.1 | E3 ubiquitin-protein ligase MARCH1 [Exaiptasia diaphana] | Q68FA7 E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus tropicalis OX | JBrowse |
| Actinoscyphia liui | gene11760.t1 | CAH3149543.1 | unnamed protein product, partial [Porites evermanni] | Q8TCQ1 E3 ubiquitin-protein ligase MARCHF1 OS=Homo sapiens OX=9606 | JBrowse |
| Actinoscyphia liui | gene13678.t1 | XP_020910041.1 | E3 ubiquitin-protein ligase MARCH8 [Exaiptasia diaphana] | Q9DBD2 E3 ubiquitin-protein ligase MARCHF8 OS=Mus musculus OX=10090 | JBrowse |
| Actinoscyphia liui | gene27000.t1 | XP_020900958.1 | E3 ubiquitin-protein ligase MARCH2 [Exaiptasia diaphana] | Q6ZQ89 E3 ubiquitin-protein ligase MARCHF6 OS=Mus musculus OX=10090 | JBrowse |
| Actinoscyphia liui | gene27193.t1 | XP_020903351.1 | E3 ubiquitin-protein ligase MARCH3 [Exaiptasia diaphana] | Q0VD59 E3 ubiquitin-protein ligase MARCHF8 OS=Bos taurus OX=9913 GN | JBrowse |
| Actinoscyphia liui | gene27193.t2 | XP_020903351.1 | E3 ubiquitin-protein ligase MARCH3 [Exaiptasia diaphana] | Q0VD59 E3 ubiquitin-protein ligase MARCHF8 OS=Bos taurus OX=9913 GN | JBrowse |
| Actinoscyphia liui | gene27359.t1 | XP_020914539.1 | E3 ubiquitin-protein ligase MARCH8 isoform X2 [Exaiptasia diaphana] | Q8TCQ1 E3 ubiquitin-protein ligase MARCHF1 OS=Homo sapiens OX=9606 | JBrowse |
