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Support counts the member genes carrying the term. % of genes is that count over all 1,022 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR24340 | HOMEOBOX PROTEIN NKX | 921 / 1,022 | 90.1% | 99.9% of 922 | ≥80% support |
| Pfam | PF00046 | Homeodomain | 922 / 1,022 | 90.2% | 100.0% of 922 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 922 / 1,022 | 90.2% | 100.0% of 922 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 922 / 1,022 | 90.2% | 100.0% of 922 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 921 / 1,022 | 90.1% | 99.9% of 922 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 921 / 1,022 | 90.1% | 99.9% of 922 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 921 / 1,022 | 90.1% | 99.9% of 922 | ≥80% support |
| GO | GO:0030154 Biological Process | cell differentiation | 921 / 1,022 | 90.1% | 99.9% of 922 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 786 / 1,022 | 76.9% | 85.3% of 922 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinoscyphia liui | gene11401.t1 | XP_020906885.1 | homeobox protein XENK-2 isoform X1 [Exaiptasia diaphana] | P42587 Homeobox protein XENK-2 OS=Xenopus laevis OX=8355 PE=2 SV=1 | JBrowse |
| Actinoscyphia liui | gene11402.t1 | XP_020906884.1 | homeobox protein Nkx-2.2 [Exaiptasia diaphana] | P42586 Homeobox protein Nkx-2.2 OS=Mus musculus OX=10090 GN=Nkx2-2 | JBrowse |
| Actinoscyphia liui | gene11403.t1 | XP_020906888.1 | homeobox protein XENK-2 [Exaiptasia diaphana] | P42587 Homeobox protein XENK-2 OS=Xenopus laevis OX=8355 PE=2 SV=1 | JBrowse |
| Actinoscyphia liui | gene11404.t1 | XP_031549660.1 | homeobox protein Nkx-2.2a-like [Actinia tenebrosa] | P42587 Homeobox protein XENK-2 OS=Xenopus laevis OX=8355 PE=2 SV=1 | JBrowse |
| Actinoscyphia liui | gene11405.t1 | KXJ25515.1 | Homeobox protein DTH-2 [Exaiptasia diaphana] | Q00401 Homeobox protein DTH-2 OS=Girardia tigrina OX=6162 GN=DTH-2 | JBrowse |
| Actinoscyphia liui | gene11406.t1 | XP_020906909.1 | homeobox protein DTH-2 [Exaiptasia diaphana] | Q00401 Homeobox protein DTH-2 OS=Girardia tigrina OX=6162 GN=DTH-2 | JBrowse |
| Actinoscyphia liui | gene18722.t1 | XP_020899871.1 | homeobox protein Nkx-2.5 [Exaiptasia diaphana] | Q90788 Homeobox protein Nkx-2.5 OS=Gallus gallus OX=9031 GN=NKX-2.5 | JBrowse |
