← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 412 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00385 | Chromo | 344 / 412 | 83.5% | 98.3% of 350 | ≥80% support |
| PANTHER | PTHR22812 | CHROMOBOX PROTEIN | 315 / 412 | 76.5% | 91.0% of 346 | ≥50% support |
| GO | GO:0006325 Biological Process | chromatin organization | 300 / 412 | 72.8% | 91.2% of 329 | ≥50% support |
| GO | GO:0000122 Biological Process | negative regulation of transcription by RNA polymerase II | 297 / 412 | 72.1% | 90.3% of 329 | ≥50% support |
| GO | GO:0003682 Molecular Function | chromatin binding | 297 / 412 | 72.1% | 90.3% of 329 | ≥50% support |
| GO | GO:0005721 Cellular Component | pericentric heterochromatin | 297 / 412 | 72.1% | 90.3% of 329 | ≥50% support |
| GO | GO:0035064 Molecular Function | methylated histone binding | 297 / 412 | 72.1% | 90.3% of 329 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinoscyphia liui | gene01848.t1 | XP_020911054.1 | heterochromatin protein 1 [Exaiptasia diaphana] | P45973 Chromobox protein homolog 5 OS=Homo sapiens OX=9606 GN=CBX5 | JBrowse |
| Actinoscyphia liui | gene11617.t1 | XP_020892838.1 | chromobox protein homolog 1 [Exaiptasia diaphana] | P23198 Chromobox protein homolog 3 OS=Mus musculus OX=10090 GN=Cbx3 | JBrowse |
| Actinoscyphia liui | gene13708.t1 | XP_044166129.1 | uncharacterized protein LOC114952003 [Acropora millepora] | Q9Y232 Chromodomain Y-like protein OS=Homo sapiens OX=9606 GN=CDYL | JBrowse |
| Actinoscyphia liui | gene17449.t1 | XP_044166129.1 | uncharacterized protein LOC114952003 [Acropora millepora] | Q9Y232 Chromodomain Y-like protein OS=Homo sapiens OX=9606 GN=CDYL | JBrowse |
| Actinoscyphia liui | gene23809.t1 | KXJ11208.1 | Retrovirus-related Pol polyprotein from transposon 412 [Exaiptasia diaphana] | Q9Y232 Chromodomain Y-like protein OS=Homo sapiens OX=9606 GN=CDYL | JBrowse |
