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This orthogroup contains 338 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 338 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00013 | KH_1 — KH domain | 271 / 338 | 80.2% | 99.3% of 273 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 271 / 338 | 80.2% | 99.3% of 273 | ≥80% support |
| PANTHER | PTHR10288 | KH DOMAIN CONTAINING RNA BINDING PROTEIN | 262 / 338 | 77.5% | 98.9% of 265 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 267 / 338 | 79.0% | 97.8% of 273 | ≥50% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 258 / 338 | 76.3% | 94.5% of 273 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 258 / 338 | 76.3% | 94.5% of 273 | ≥50% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 258 / 338 | 76.3% | 94.5% of 273 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 224 / 338 | 66.3% | 82.1% of 273 | ≥50% support |
| KEGG | K13210 | FUBP — Spliceosome | 206 / 338 | 61.0% | 96.3% of 214 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinoscyphia liui | gene15187.t1 | XP_031552924.1 | far upstream element-binding protein 3-like isoform X1 [Actinia tenebrosa] | Q96AE4 Far upstream element-binding protein 1 OS=Homo sapiens OX=96 | JBrowse |
