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This orthogroup contains 253 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 253 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12945 | TRANSLATION INITIATION FACTOR EIF3-RELATED | 221 / 253 | 87.4% | 100.0% of 221 | ≥80% support |
| Pfam | PF04189 | Gcd10p | 211 / 253 | 83.4% | 99.5% of 212 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 221 / 253 | 87.4% | 100.0% of 221 | ≥80% support |
| GO | GO:0030488 Biological Process | tRNA methylation | 221 / 253 | 87.4% | 100.0% of 221 | ≥80% support |
| GO | GO:0031515 Cellular Component | tRNA (m1A) methyltransferase complex | 221 / 253 | 87.4% | 100.0% of 221 | ≥80% support |
| KEGG | K03256 | TRM6, GCD10 — Transfer RNA biogenesis | 168 / 253 | 66.4% | 99.4% of 169 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinoscyphia liui | gene20332.t1 | XP_020894318.1 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 [Exaiptasia diaphana] | Q8CE96 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subu | JBrowse |
