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This orthogroup contains 251 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 251 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11225 | NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN | 228 / 251 | 90.8% | 100.0% of 228 | ≥80% support |
| Pfam | PF04097 | Nic96 | 211 / 251 | 84.1% | 99.5% of 212 | ≥80% support |
| GO | GO:0005643 Cellular Component | nuclear pore | 228 / 251 | 90.8% | 100.0% of 228 | ≥80% support |
| GO | GO:0006606 Biological Process | protein import into nucleus | 228 / 251 | 90.8% | 100.0% of 228 | ≥80% support |
| GO | GO:0016973 Biological Process | poly(A)+ mRNA export from nucleus | 228 / 251 | 90.8% | 100.0% of 228 | ≥80% support |
| GO | GO:0017056 Molecular Function | structural constituent of nuclear pore | 228 / 251 | 90.8% | 100.0% of 228 | ≥80% support |
| KEGG | K14309 | NUP93, NIC96 — Messenger RNA biogenesis | 161 / 251 | 64.1% | 98.2% of 164 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinoscyphia liui | gene01741.t1 | XP_020900009.1 | nuclear pore complex protein Nup93 [Exaiptasia diaphana] | Q6NX12 Nuclear pore complex protein Nup93 OS=Xenopus tropicalis OX= | JBrowse |
| Actinoscyphia liui | gene01742.t1 | XP_020900009.1 | nuclear pore complex protein Nup93 [Exaiptasia diaphana] | Q7ZU29 Nuclear pore complex protein Nup93 OS=Danio rerio OX=7955 GN | JBrowse |
