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This orthogroup contains 217 genes from 134 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 217 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00025 | Arf — ADP-ribosylation factor family | 188 / 217 | 86.6% | 96.9% of 194 | ≥80% support |
| GO | GO:0003924 Molecular Function | GTPase activity | 188 / 217 | 86.6% | 96.9% of 194 | ≥80% support |
| GO | GO:0005525 Molecular Function | GTP binding | 188 / 217 | 86.6% | 96.9% of 194 | ≥80% support |
| PANTHER | PTHR11711 | ADP RIBOSYLATION FACTOR-RELATED | 164 / 217 | 75.6% | 86.3% of 190 | ≥50% support |
| Pfam | PF00643 | zf-B_box — B-box zinc finger | 146 / 217 | 67.3% | 75.3% of 194 | ≥50% support |
| Pfam | PF13445 | zf-RING_UBOX — RING-type zinc-finger | 131 / 217 | 60.4% | 67.5% of 194 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 164 / 217 | 75.6% | 84.5% of 194 | ≥50% support |
| GO | GO:0005765 Cellular Component | lysosomal membrane | 164 / 217 | 75.6% | 84.5% of 194 | ≥50% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 164 / 217 | 75.6% | 84.5% of 194 | ≥50% support |
| GO | GO:0006886 Biological Process | intracellular protein transport | 164 / 217 | 75.6% | 84.5% of 194 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 164 / 217 | 75.6% | 84.5% of 194 | ≥50% support |
| GO | GO:0016192 Biological Process | vesicle-mediated transport | 164 / 217 | 75.6% | 84.5% of 194 | ≥50% support |
| KEGG | K07963 | TRIM23, ARFD1 — GTP-binding proteins | 146 / 217 | 67.3% | 95.4% of 153 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinoscyphia liui | gene23394.t1 | XP_020894782.1 | E3 ubiquitin-protein ligase TRIM23 [Exaiptasia diaphana] | P36406 E3 ubiquitin-protein ligase TRIM23 OS=Homo sapiens OX=9606 G | JBrowse |
