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Support counts the member genes carrying the term. % of genes is that count over all 248 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR47958 | ATP-DEPENDENT RNA HELICASE DBP3 | 212 / 248 | 85.5% | 97.3% of 218 | ≥80% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 201 / 248 | 81.1% | 92.2% of 218 | ≥80% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 216 / 248 | 87.1% | 99.1% of 218 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 212 / 248 | 85.5% | 97.3% of 218 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 210 / 248 | 84.7% | 96.3% of 218 | ≥80% support |
| GO | GO:0006406 Biological Process | mRNA export from nucleus | 210 / 248 | 84.7% | 96.3% of 218 | ≥80% support |
| Pfam | PF00270 | DEAD | 180 / 248 | 72.6% | 82.6% of 218 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 181 / 248 | 73.0% | 83.0% of 218 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 180 / 248 | 72.6% | 82.6% of 218 | ≥50% support |
| KEGG | K12812 | DDX39B, UAP56, SUB2 — Spliceosome | 191 / 248 | 77.0% | 98.5% of 194 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora loripes | alor_g19150.t1 | XP_044174476.1 | hercynylcysteine sulfoxide lyase-like [Acropora millepora] | Q9Z1N5 Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN= | JBrowse |
