← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 3,705 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10131 | TNF RECEPTOR ASSOCIATED FACTOR | 3218 / 3,705 | 86.9% | 99.7% of 3,227 | ≥80% support |
| GO | GO:0033209 Biological Process | tumor necrosis factor-mediated signaling pathway | 3100 / 3,705 | 83.7% | 94.4% of 3,283 | ≥80% support |
| GO | GO:0070534 Biological Process | protein K63-linked ubiquitination | 3100 / 3,705 | 83.7% | 94.4% of 3,283 | ≥80% support |
| Pfam | PF21355 | TRAF-mep_MATH — TRAF/meprin, MATH domain | 2732 / 3,705 | 73.7% | 83.7% of 3,264 | ≥50% support |
| Pfam | PF02176 | zf-TRAF — TRAF-type zinc finger | 2490 / 3,705 | 67.2% | 76.3% of 3,264 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 2918 / 3,705 | 78.8% | 88.9% of 3,283 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 2785 / 3,705 | 75.2% | 84.8% of 3,283 | ≥50% support |
| GO | GO:0007165 Biological Process | signal transduction | 2406 / 3,705 | 64.9% | 73.3% of 3,283 | ≥50% support |
| GO | GO:0042981 Biological Process | regulation of apoptotic process | 2404 / 3,705 | 64.9% | 73.2% of 3,283 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0017.g59.t1 | XP_029189366.2 | TNF receptor-associated factor 3-like [Acropora millepora] | Q60803 TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora microphthalma | amic_s0017.g60.t1 | XP_015758361.1 | PREDICTED: TNF receptor-associated factor 3-like [Acropora digitifera] | Q60803 TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora microphthalma | amic_s0021.g31.t1 | XP_015763747.1 | PREDICTED: TNF receptor-associated factor 2-like [Acropora digitifera] | Q60803 TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora microphthalma | amic_s0030.g26.t1 | XP_029186836.2 | TNF receptor-associated factor 3-like [Acropora millepora] | Q60803 TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora microphthalma | amic_s0057.g32.t1 | XP_015772347.1 | PREDICTED: TNF receptor-associated factor 2-like [Acropora digitifera] | Q12933 TNF receptor-associated factor 2 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora microphthalma | amic_s0064.g1.t1 | XP_044173426.1 | TNF receptor-associated factor 6-like [Acropora millepora] | B6CJY4 TNF receptor-associated factor 6 OS=Cercocebus atys OX=9531 | JBrowse |
| Acropora microphthalma | amic_s0064.g1.t2 | XP_015767597.1 | PREDICTED: TNF receptor-associated factor 3-like isoform X4 [Acropora digitifera] | Q3ZCC3 TNF receptor-associated factor 6 OS=Bos taurus OX=9913 GN=TR | JBrowse |
| Acropora microphthalma | amic_s0064.g13.t1 | XP_015765588.1 | PREDICTED: TNF receptor-associated factor 3-like [Acropora digitifera] | Q60803 TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora microphthalma | amic_s0064.g15.t1 | XP_015765588.1 | PREDICTED: TNF receptor-associated factor 3-like [Acropora digitifera] | – | JBrowse |
| Acropora microphthalma | amic_s0064.g15.t2 | XP_015778264.1 | PREDICTED: TNF receptor-associated factor 3-like [Acropora digitifera] | – | JBrowse |
| Acropora microphthalma | amic_s0064.g16.t1 | XP_015765592.1 | PREDICTED: TNF receptor-associated factor 1-like [Acropora digitifera] | Q60803 TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora microphthalma | amic_s0064.g3.t1 | XP_015774080.1 | PREDICTED: TNF receptor-associated factor 3-like isoform X1 [Acropora digitifera] | Q12933 TNF receptor-associated factor 2 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora microphthalma | amic_s0064.g4.t1 | XP_044173415.1 | TNF receptor-associated factor 3-like isoform X1 [Acropora millepora] | Q12933 TNF receptor-associated factor 2 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora microphthalma | amic_s0064.g5.t1 | XP_044174709.1 | TNF receptor-associated factor 3-like [Acropora millepora] | Q60803 TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora microphthalma | amic_s0173.g73.t1 | XP_015764761.1 | PREDICTED: TNF receptor-associated factor 1-like [Acropora digitifera] | – | JBrowse |
| Acropora microphthalma | amic_s0173.g74.t1 | XP_044173414.1 | TNF receptor-associated factor 1-like [Acropora millepora] | Q12933 TNF receptor-associated factor 2 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora microphthalma | amic_s0173.g75.t1 | XP_044173426.1 | TNF receptor-associated factor 6-like [Acropora millepora] | B6CJY4 TNF receptor-associated factor 6 OS=Cercocebus atys OX=9531 | JBrowse |
| Acropora microphthalma | amic_s0825.g1.t1 | XP_029189366.2 | TNF receptor-associated factor 3-like [Acropora millepora] | – | JBrowse |
