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This orthogroup contains 2,803 genes from 145 species (2,804 sequences — 1 extra sequences share a gene identifier with another member, so they are not counted twice). The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 2,803 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00028 | Cadherin | 2322 / 2,803 | 82.8% | 97.6% of 2,380 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 2396 / 2,803 | 85.5% | 98.8% of 2,426 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 2369 / 2,803 | 84.5% | 97.7% of 2,426 | ≥80% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 2365 / 2,803 | 84.4% | 97.5% of 2,426 | ≥80% support |
| GO | GO:0007155 Biological Process | cell adhesion | 2247 / 2,803 | 80.2% | 92.6% of 2,426 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 2228 / 2,803 | 79.5% | 91.8% of 2,426 | ≥50% support |
| GO | GO:0098609 Biological Process | cell-cell adhesion | 1660 / 2,803 | 59.2% | 68.4% of 2,426 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0002.g226.t1 | XP_029204274.2 | cadherin-related tumor suppressor-like [Acropora millepora] | – | JBrowse |
| Acropora microphthalma | amic_s0002.g227.t1 | XP_029204274.2 | cadherin-related tumor suppressor-like [Acropora millepora] | Q9V5N8 Protocadherin-like wing polarity protein stan OS=Drosophila | JBrowse |
| Acropora microphthalma | amic_s0002.g228.t1 | XP_029204274.2 | cadherin-related tumor suppressor-like [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora microphthalma | amic_s0056.g28.t1 | XP_044181720.1 | LOW QUALITY PROTEIN: cadherin-23-like [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora microphthalma | amic_s0056.g28.t2 | XP_044181720.1 | LOW QUALITY PROTEIN: cadherin-23-like [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora microphthalma | amic_s0056.g29.t1 | XP_044181720.1 | LOW QUALITY PROTEIN: cadherin-23-like [Acropora millepora] | Q9H251 Cadherin-23 OS=Homo sapiens OX=9606 GN=CDH23 PE=1 SV=2 | JBrowse |
| Acropora microphthalma | amic_s0056.g29.t2 | XP_044181720.1 | LOW QUALITY PROTEIN: cadherin-23-like [Acropora millepora] | Q9H251 Cadherin-23 OS=Homo sapiens OX=9606 GN=CDH23 PE=1 SV=2 | JBrowse |
| Acropora microphthalma | amic_s0077.g19.t1 | XP_044175394.1 | cadherin-23-like [Acropora millepora] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Acropora microphthalma | amic_s0090.g21.t1 | XP_029199018.2 | protocadherin Fat 4-like [Acropora millepora] | Q24292 Protein dachsous OS=Drosophila melanogaster OX=7227 GN=ds PE | JBrowse |
| Acropora microphthalma | amic_s0107.g1.t1 | XP_029179574.2 | uncharacterized protein LOC114947057, partial [Acropora millepora] | Q8R508 Protocadherin Fat 3 OS=Rattus norvegicus OX=10116 GN=Fat3 PE | JBrowse |
| Acropora microphthalma | amic_s0154.g37.t1 | XP_044176312.1 | protocadherin Fat 1-like [Acropora millepora] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
| Acropora microphthalma | amic_s0154.g38.t1 | XP_044176312.1 | protocadherin Fat 1-like [Acropora millepora] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
| Acropora microphthalma | amic_s0192.g28.t1 | XP_044176472.1 | protocadherin Fat 4-like [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora microphthalma | amic_s0286.g9.t1 | XP_029199742.2 | cadherin-23-like isoform X1 [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora microphthalma | amic_s0286.g9.t2 | XP_029199743.2 | cadherin-23-like isoform X2 [Acropora millepora] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Acropora microphthalma | amic_s3185.g1.t1 | XP_015747591.1 | PREDICTED: cadherin-23-like [Acropora digitifera] | P33450 Cadherin-related tumor suppressor OS=Drosophila melanogaster | JBrowse |
| Acropora microphthalma | amic_s3526.g1.t1 | XP_029203870.2 | fibrocystin-L-like isoform X2 [Acropora millepora] | Q9VW71 Fat-like cadherin-related tumor suppressor homolog OS=Drosop | JBrowse |
| Acropora microphthalma | amic_s4243.g1.t1 | XP_015749466.1 | PREDICTED: cadherin-10-like [Acropora digitifera] | Q91838 Cadherin-20 OS=Xenopus laevis OX=8355 GN=cdh20 PE=2 SV=1 | JBrowse |
