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This orthogroup contains 1,919 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,919 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF14752 | RBP_receptor — Retinol binding protein receptor | 1628 / 1,919 | 84.8% | 99.8% of 1,631 | ≥80% support |
| GO | GO:0034632 Molecular Function | retinol transmembrane transporter activity | 1628 / 1,919 | 84.8% | 99.8% of 1,631 | ≥80% support |
| GO | GO:0038023 Molecular Function | signaling receptor activity | 1628 / 1,919 | 84.8% | 99.8% of 1,631 | ≥80% support |
| PANTHER | PTHR21444 | COILED-COIL DOMAIN-CONTAINING PROTEIN 180 | 1252 / 1,919 | 65.2% | 99.4% of 1,260 | ≥50% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 1254 / 1,919 | 65.4% | 76.9% of 1,631 | ≥50% support |
| GO | GO:0071939 Biological Process | vitamin A import into cell | 1252 / 1,919 | 65.2% | 76.8% of 1,631 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0120.g14.t1 | XP_044181350.1 | stimulated by retinoic acid gene 6 protein-like [Acropora millepora] | Q9DBN1 Stimulated by retinoic acid gene 6 protein-like OS=Mus muscu | JBrowse |
| Acropora microphthalma | amic_s0120.g15.t1 | XP_015757551.1 | PREDICTED: stimulated by retinoic acid gene 6 protein homolog isoform X3 [Acropora digitifera] | Q9DBN1 Stimulated by retinoic acid gene 6 protein-like OS=Mus muscu | JBrowse |
| Acropora microphthalma | amic_s0120.g17.t1 | XP_015765168.1 | PREDICTED: stimulated by retinoic acid gene 6 protein homolog isoform X3 [Acropora digitifera] | Q9DBN1 Stimulated by retinoic acid gene 6 protein-like OS=Mus muscu | JBrowse |
| Acropora microphthalma | amic_s0122.g27.t1 | XP_029194123.2 | stimulated by retinoic acid gene 6 protein-like isoform X1 [Acropora millepora] | Q9DBN1 Stimulated by retinoic acid gene 6 protein-like OS=Mus muscu | JBrowse |
| Acropora microphthalma | amic_s0761.g1.t1 | XP_015757552.1 | PREDICTED: stimulated by retinoic acid gene 6 protein homolog isoform X4 [Acropora digitifera] | Q9DBN1 Stimulated by retinoic acid gene 6 protein-like OS=Mus muscu | JBrowse |
| Acropora microphthalma | amic_s0842.g1.t1 | XP_044181347.1 | stimulated by retinoic acid gene 6 protein-like isoform X5 [Acropora millepora] | – | JBrowse |
