← Back to the gene family browser
This orthogroup contains 1,231 genes from 92 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,231 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10131 | TNF RECEPTOR ASSOCIATED FACTOR | 746 / 1,231 | 60.6% | 97.4% of 766 | ≥50% support |
| Pfam | PF02176 | zf-TRAF — TRAF-type zinc finger | 678 / 1,231 | 55.1% | 82.1% of 826 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 789 / 1,231 | 64.1% | 92.3% of 855 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0078.g10.t1 | XP_044175902.1 | TNF receptor-associated factor 5-like isoform X1 [Acropora millepora] | – | JBrowse |
| Acropora microphthalma | amic_s0114.g35.t1 | XP_044178174.1 | TNF receptor-associated factor 3-like isoform X4 [Acropora millepora] | – | JBrowse |
| Acropora microphthalma | amic_s0212.g5.t1 | XP_044184774.1 | TNF receptor-associated factor 6-like [Acropora millepora] | – | JBrowse |
| Acropora microphthalma | amic_s0234.g2.t1 | XP_044166489.1 | uncharacterized protein LOC114948685 [Acropora millepora] | – | JBrowse |
| Acropora microphthalma | amic_s0309.g17.t1 | CAH3153460.1 | unnamed protein product [Porites lobata] | – | JBrowse |
| Acropora microphthalma | amic_s0448.g6.t1 | XP_044170537.1 | RING finger protein DG17-like [Acropora millepora] | – | JBrowse |
| Acropora microphthalma | amic_s0542.g3.t1 | XP_044163974.1 | TNF receptor-associated factor 5-like isoform X3 [Acropora millepora] | – | JBrowse |
| Acropora microphthalma | amic_s1813.g2.t1 | XP_015759391.1 | PREDICTED: TNF receptor-associated factor 5-like [Acropora digitifera] | – | JBrowse |
| Acropora microphthalma | amic_s2054.g1.t1 | XP_015754659.1 | PREDICTED: TNF receptor-associated factor 5-like [Acropora digitifera] | – | JBrowse |
| Acropora microphthalma | amic_s2208.g1.t1 | XP_015779121.1 | PREDICTED: TNF receptor-associated factor 3-like isoform X3 [Acropora digitifera] | – | JBrowse |
