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This orthogroup contains 944 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 944 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF07716 | bZIP_2 — Basic region leucine zipper | 859 / 944 | 91.0% | 100.0% of 859 | ≥80% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 859 / 944 | 91.0% | 100.0% of 859 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 859 / 944 | 91.0% | 100.0% of 859 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 770 / 944 | 81.6% | 89.6% of 859 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 769 / 944 | 81.5% | 89.5% of 859 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 769 / 944 | 81.5% | 89.5% of 859 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 757 / 944 | 80.2% | 88.1% of 859 | ≥80% support |
| PANTHER | PTHR11988 | THYROTROPH EMBRYONIC FACTOR RELATED | 737 / 944 | 78.1% | 93.8% of 786 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0011.g70.t1 | XP_015768917.1 | PREDICTED: transcription factor VBP-like [Acropora digitifera] | P97516 Thyrotroph embryonic factor (Fragment) OS=Phodopus sungorus | JBrowse |
| Acropora microphthalma | amic_s0042.g85.t1 | XP_029211248.1 | protein giant-like [Acropora millepora] | – | JBrowse |
| Acropora microphthalma | amic_s0075.g23.t1 | XP_029203718.1 | thyrotroph embryonic factor-like [Acropora millepora] | Q9JLC6 Thyrotroph embryonic factor OS=Mus musculus OX=10090 GN=Tef | JBrowse |
| Acropora microphthalma | amic_s0075.g25.t1 | XP_015747986.1 | PREDICTED: transcription factor VBP-like [Acropora digitifera] | Q16534 Hepatic leukemia factor OS=Homo sapiens OX=9606 GN=HLF PE=1 | JBrowse |
| Acropora microphthalma | amic_s0098.g17.t1 | XP_015763525.1 | PREDICTED: thyrotroph embryonic factor-like [Acropora digitifera] | Q32PF6 D site-binding protein OS=Bos taurus OX=9913 GN=DBP PE=2 SV= | JBrowse |
