← Back to the gene family browser
This orthogroup contains 868 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 868 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 766 / 868 | 88.3% | 100.0% of 766 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 767 / 868 | 88.4% | 100.0% of 767 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 766 / 868 | 88.3% | 99.9% of 767 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0014.g222.t1 | XP_015776442.1 | PREDICTED: glycine-rich RNA-binding protein 2-like [Acropora digitifera] | Q03250 Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana O | JBrowse |
| Acropora microphthalma | amic_s0014.g223.t1 | XP_015776432.1 | PREDICTED: glycine-rich RNA-binding protein 10-like [Acropora digitifera] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Acropora microphthalma | amic_s0226.g12.t1 | XP_029202417.1 | SRA stem-loop-interacting RNA-binding protein, mitochondrial-like [Acropora millepora] | Q9VVE5 RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melan | JBrowse |
