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This orthogroup contains 619 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 619 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR47981 | RAB FAMILY | 517 / 619 | 83.5% | 98.1% of 527 | ≥80% support |
| Pfam | PF00071 | Ras | 527 / 619 | 85.1% | 99.6% of 529 | ≥80% support |
| GO | GO:0003924 Molecular Function | GTPase activity | 527 / 619 | 85.1% | 99.4% of 530 | ≥80% support |
| GO | GO:0005525 Molecular Function | GTP binding | 527 / 619 | 85.1% | 99.4% of 530 | ≥80% support |
| GO | GO:0005764 Cellular Component | lysosome | 517 / 619 | 83.5% | 97.6% of 530 | ≥80% support |
| GO | GO:0005770 Cellular Component | late endosome | 517 / 619 | 83.5% | 97.6% of 530 | ≥80% support |
| GO | GO:0045335 Cellular Component | phagocytic vesicle | 517 / 619 | 83.5% | 97.6% of 530 | ≥80% support |
| GO | GO:0090385 Biological Process | phagosome-lysosome fusion | 517 / 619 | 83.5% | 97.6% of 530 | ≥80% support |
| GO | GO:0008333 Biological Process | endosome to lysosome transport | 516 / 619 | 83.4% | 97.4% of 530 | ≥80% support |
| GO | GO:0005802 Cellular Component | trans-Golgi network | 331 / 619 | 53.5% | 62.5% of 530 | ≥50% support |
| GO | GO:0005794 Cellular Component | Golgi apparatus | 322 / 619 | 52.0% | 60.8% of 530 | ≥50% support |
| GO | GO:0016192 Biological Process | vesicle-mediated transport | 322 / 619 | 52.0% | 60.8% of 530 | ≥50% support |
| GO | GO:0031982 Cellular Component | vesicle | 322 / 619 | 52.0% | 60.8% of 530 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0017.g52.t1 | XP_029189370.1 | ras-related protein Rab-38-like isoform X2 [Acropora millepora] | Q55E31 Ras-related protein Rab-32B OS=Dictyostelium discoideum OX=4 | JBrowse |
| Acropora microphthalma | amic_s0116.g20.t1 | XP_029201652.1 | ras-related protein Rab-7L1-like [Acropora millepora] | Q63481 Ras-related protein Rab-7L1 OS=Rattus norvegicus OX=10116 GN | JBrowse |
| Acropora microphthalma | amic_s0127.g6.t1 | XP_015764315.1 | PREDICTED: ras-related protein Rab-38-like [Acropora digitifera] | Q8QZZ8 Ras-related protein Rab-38 OS=Mus musculus OX=10090 GN=Rab38 | JBrowse |
