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This orthogroup contains 496 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 496 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 448 / 496 | 90.3% | 100.0% of 448 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 448 / 496 | 90.3% | 100.0% of 448 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 448 / 496 | 90.3% | 100.0% of 448 | ≥80% support |
| GO | GO:1990904 Cellular Component | ribonucleoprotein complex | 418 / 496 | 84.3% | 93.3% of 448 | ≥80% support |
| PANTHER | PTHR10352 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 255 / 496 | 51.4% | 57.6% of 443 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0010.g28.t1 | XP_015769901.1 | PREDICTED: ELAV-like protein 3 [Acropora digitifera] | Q28GD4 ELAV-like protein 2 OS=Xenopus tropicalis OX=8364 GN=elavl2 | JBrowse |
| Acropora microphthalma | amic_s0010.g31.t1 | XP_029200129.1 | ELAV-like protein 1 [Acropora millepora] | Q15717 ELAV-like protein 1 OS=Homo sapiens OX=9606 GN=ELAVL1 PE=1 S | JBrowse |
| Acropora microphthalma | amic_s0015.g64.t1 | XP_015762603.1 | PREDICTED: ELAV-like protein 1-B [Acropora digitifera] | Q14576 ELAV-like protein 3 OS=Homo sapiens OX=9606 GN=ELAVL3 PE=1 S | JBrowse |
| Acropora microphthalma | amic_s0015.g64.t2 | XP_015762603.1 | PREDICTED: ELAV-like protein 1-B [Acropora digitifera] | Q5U259 ELAV-like protein 1-B OS=Xenopus laevis OX=8355 GN=elavl1-b | JBrowse |
