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This orthogroup contains 400 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 400 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 320 / 400 | 80.0% | 99.7% of 321 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 322 / 400 | 80.5% | 99.7% of 323 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 320 / 400 | 80.0% | 99.1% of 323 | ≥80% support |
| GO | GO:1990904 Cellular Component | ribonucleoprotein complex | 301 / 400 | 75.3% | 93.2% of 323 | ≥50% support |
| KEGG | K24990 | RBMS — Domain-containing proteins not elsewhere classified | 276 / 400 | 69.0% | 99.6% of 277 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0145.g57.t1 | XP_015752160.1 | PREDICTED: protein alan shepard-like [Acropora digitifera] | B4MM23 Protein alan shepard OS=Drosophila willistoni OX=7260 GN=she | JBrowse |
