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This orthogroup contains 393 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 393 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR18898 | NUCLEOPROTEIN TPR-RELATED | 286 / 393 | 72.8% | 98.0% of 292 | ≥50% support |
| Pfam | PF07926 | TPR_MLP1_2 — TPR/MLP1/MLP2-like protein | 219 / 393 | 55.7% | 93.6% of 234 | ≥50% support |
| GO | GO:0005643 Cellular Component | nuclear pore | 286 / 393 | 72.8% | 98.3% of 291 | ≥50% support |
| GO | GO:0006406 Biological Process | mRNA export from nucleus | 286 / 393 | 72.8% | 98.3% of 291 | ≥50% support |
| GO | GO:0017056 Molecular Function | structural constituent of nuclear pore | 286 / 393 | 72.8% | 98.3% of 291 | ≥50% support |
| GO | GO:1901673 Biological Process | regulation of mitotic spindle assembly | 254 / 393 | 64.6% | 87.3% of 291 | ≥50% support |
| GO | GO:0006606 Biological Process | protein import into nucleus | 219 / 393 | 55.7% | 75.3% of 291 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0315.g5.t1 | XP_029191501.2 | nucleoprotein TPR-like isoform X3 [Acropora millepora] | P12270 Nucleoprotein TPR OS=Homo sapiens OX=9606 GN=TPR PE=1 SV=3 | JBrowse |
| Acropora microphthalma | amic_s0315.g6.t1 | XP_029191500.2 | nucleoprotein TPR-like isoform X2 [Acropora millepora] | F1MA98 Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 | JBrowse |
| Acropora microphthalma | amic_s0315.g6.t2 | XP_029191501.2 | nucleoprotein TPR-like isoform X3 [Acropora millepora] | F1MA98 Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 | JBrowse |
| Acropora microphthalma | amic_s0315.g6.t3 | XP_029191499.2 | nucleoprotein TPR-like isoform X1 [Acropora millepora] | F1MA98 Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 | JBrowse |
| Acropora microphthalma | amic_s3270.g1.t1 | XP_029191501.2 | nucleoprotein TPR-like isoform X3 [Acropora millepora] | Q5EE04 Nucleoprotein TPR (Fragment) OS=Xenopus laevis OX=8355 GN=tp | JBrowse |
| Acropora microphthalma | amic_s3986.g1.t1 | XP_015755811.1 | PREDICTED: nucleoprotein TPR-like [Acropora digitifera] | F1MA98 Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 | JBrowse |
