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This orthogroup contains 361 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 361 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12610 | SINGLE STRANDED DNA BINDING PROTEIN | 274 / 361 | 75.9% | 97.9% of 280 | ≥50% support |
| Pfam | PF04503 | SSDP | 241 / 361 | 66.8% | 98.0% of 246 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 274 / 361 | 75.9% | 97.9% of 280 | ≥50% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 274 / 361 | 75.9% | 97.9% of 280 | ≥50% support |
| GO | GO:0003697 Molecular Function | single-stranded DNA binding | 242 / 361 | 67.0% | 86.4% of 280 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 237 / 361 | 65.7% | 84.6% of 280 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0044.g77.t1 | XP_015775786.1 | PREDICTED: single-stranded DNA-binding protein 3-like isoform X4 [Acropora digitifera] | Q98948 Single-stranded DNA-binding protein 3 OS=Gallus gallus OX=90 | JBrowse |
| Acropora microphthalma | amic_s0044.g77.t2 | CAH3178704.1 | unnamed protein product [Porites lobata] | Q98948 Single-stranded DNA-binding protein 3 OS=Gallus gallus OX=90 | JBrowse |
| Acropora microphthalma | amic_s0044.g77.t3 | CAH3178704.1 | unnamed protein product [Porites lobata] | Q9BWW4 Single-stranded DNA-binding protein 3 OS=Homo sapiens OX=960 | JBrowse |
| Acropora microphthalma | amic_s0044.g77.t4 | XP_015775779.1 | PREDICTED: single-stranded DNA-binding protein 3-like isoform X3 [Acropora digitifera] | Q9BWW4 Single-stranded DNA-binding protein 3 OS=Homo sapiens OX=960 | JBrowse |
| Acropora microphthalma | amic_s0044.g77.t5 | XP_015775786.1 | PREDICTED: single-stranded DNA-binding protein 3-like isoform X4 [Acropora digitifera] | Q98948 Single-stranded DNA-binding protein 3 OS=Gallus gallus OX=90 | JBrowse |
| Acropora microphthalma | amic_s1836.g1.t1 | XP_015775786.1 | PREDICTED: single-stranded DNA-binding protein 3-like isoform X4 [Acropora digitifera] | – | JBrowse |
