← Back to the gene family browser
This orthogroup contains 346 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 346 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0008270 Molecular Function | zinc ion binding | 295 / 346 | 85.3% | 98.3% of 300 | ≥80% support |
| Pfam | PF01485 | IBR | 175 / 346 | 50.6% | 58.9% of 297 | ≥50% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 180 / 346 | 52.0% | 60.0% of 300 | ≥50% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 178 / 346 | 51.5% | 59.3% of 300 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0146.g43.t1 | XP_029207177.1 | E3 SUMO-protein ligase NSE2-like [Acropora millepora] | Q7ZXH2 E3 SUMO-protein ligase NSE2 OS=Xenopus laevis OX=8355 GN=nsm | JBrowse |
| Acropora microphthalma | amic_s0146.g44.t1 | XP_015762684.1 | PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Acropora digitifera] | Q4KLT0 E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis OX=8355 | JBrowse |
