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This orthogroup contains 341 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 341 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21497 | UBIQUITIN LIGASE E3 ALPHA-RELATED | 291 / 341 | 85.3% | 99.7% of 292 | ≥80% support |
| GO | GO:0000151 Cellular Component | ubiquitin ligase complex | 291 / 341 | 85.3% | 99.7% of 292 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 291 / 341 | 85.3% | 99.7% of 292 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 291 / 341 | 85.3% | 99.7% of 292 | ≥80% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 291 / 341 | 85.3% | 99.7% of 292 | ≥80% support |
| GO | GO:0071596 Biological Process | ubiquitin-dependent protein catabolic process via the N-end rule pathway | 291 / 341 | 85.3% | 99.7% of 292 | ≥80% support |
| Pfam | PF18995 | PRT6_C — Proteolysis_6 C-terminal | 174 / 341 | 51.0% | 72.8% of 239 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0079.g40.t1 | XP_029192377.2 | E3 ubiquitin-protein ligase ubr3-like [Acropora millepora] | F1QJX5 E3 ubiquitin-protein ligase ubr3 OS=Danio rerio OX=7955 GN=u | JBrowse |
| Acropora microphthalma | amic_s2486.g1.t1 | XP_029192377.2 | E3 ubiquitin-protein ligase ubr3-like [Acropora millepora] | Q9W3M3 E3 ubiquitin-protein ligase Ubr3 OS=Drosophila melanogaster | JBrowse |
| Acropora microphthalma | amic_s2500.g1.t1 | XP_015778099.1 | PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Acropora digitifera] | – | JBrowse |
| Acropora microphthalma | amic_s3943.g1.t1 | XP_029192377.2 | E3 ubiquitin-protein ligase ubr3-like [Acropora millepora] | Q6ZT12 E3 ubiquitin-protein ligase UBR3 OS=Homo sapiens OX=9606 GN= | JBrowse |
