← Back to the gene family browser
This orthogroup contains 334 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 334 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13948 | RNA-BINDING PROTEIN | 282 / 334 | 84.4% | 99.7% of 283 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 283 / 334 | 84.7% | 99.3% of 285 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 282 / 334 | 84.4% | 99.0% of 285 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 282 / 334 | 84.4% | 99.0% of 285 | ≥80% support |
| Pfam | PF17780 | OCRE | 229 / 334 | 68.6% | 83.9% of 273 | ≥50% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 202 / 334 | 60.5% | 74.0% of 273 | ≥50% support |
| Pfam | PF01585 | G-patch | 170 / 334 | 50.9% | 62.3% of 273 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 266 / 334 | 79.6% | 93.3% of 285 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0310.g1.t1 | XP_044167768.1 | RNA-binding protein 5-like isoform X2 [Acropora millepora] | A4IGK4 RNA-binding protein 5 OS=Xenopus tropicalis OX=8364 GN=rbm5 | JBrowse |
| Acropora microphthalma | amic_s0310.g1.t2 | XP_044167768.1 | RNA-binding protein 5-like isoform X2 [Acropora millepora] | A0JMV4 RNA-binding protein 5-A OS=Xenopus laevis OX=8355 GN=rbm5-a | JBrowse |
