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This orthogroup contains 330 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 330 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR44133 | CLEAVAGE STIMULATION FACTOR SUBUNIT 1 | 200 / 330 | 60.6% | 77.8% of 257 | ≥50% support |
| Pfam | PF16699 | CSTF1_dimer — Cleavage stimulation factor subunit 1, dimerisation domain | 227 / 330 | 68.8% | 78.0% of 291 | ≥50% support |
| Pfam | PF00400 | WD40 — WD domain, G-beta repeat | 195 / 330 | 59.1% | 67.0% of 291 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 200 / 330 | 60.6% | 69.2% of 289 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 200 / 330 | 60.6% | 69.2% of 289 | ≥50% support |
| GO | GO:0005848 Cellular Component | mRNA cleavage stimulating factor complex | 200 / 330 | 60.6% | 69.2% of 289 | ≥50% support |
| GO | GO:0031124 Biological Process | mRNA 3'-end processing | 200 / 330 | 60.6% | 69.2% of 289 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0195.g23.t1 | XP_029201074.1 | cleavage stimulation factor subunit 1-like isoform X2 [Acropora millepora] | Q05048 Cleavage stimulation factor subunit 1 OS=Homo sapiens OX=960 | JBrowse |
| Acropora microphthalma | amic_s0195.g23.t2 | XP_029201073.2 | uncharacterized protein LOC114965536 isoform X1 [Acropora millepora] | Q05048 Cleavage stimulation factor subunit 1 OS=Homo sapiens OX=960 | JBrowse |
