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This orthogroup contains 300 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 300 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12747 | ELONGATOR COMPLEX PROTEIN 1 | 263 / 300 | 87.7% | 99.6% of 264 | ≥80% support |
| Pfam | PF04762 | IKI3 | 242 / 300 | 80.7% | 99.6% of 243 | ≥80% support |
| GO | GO:0002098 Biological Process | tRNA wobble uridine modification | 265 / 300 | 88.3% | 99.6% of 266 | ≥80% support |
| GO | GO:0033588 Cellular Component | elongator holoenzyme complex | 265 / 300 | 88.3% | 99.6% of 266 | ≥80% support |
| GO | GO:0005829 Cellular Component | cytosol | 264 / 300 | 88.0% | 99.3% of 266 | ≥80% support |
| GO | GO:0000049 Molecular Function | tRNA binding | 263 / 300 | 87.7% | 98.9% of 266 | ≥80% support |
| GO | GO:0002926 Biological Process | tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation | 263 / 300 | 87.7% | 98.9% of 266 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 177 / 300 | 59.0% | 66.5% of 266 | ≥50% support |
| KEGG | K11373 | ELP1, IKI3, IKBKAP — Transfer RNA biogenesis | 177 / 300 | 59.0% | 97.8% of 181 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0149.g46.t1 | XP_029186073.2 | elongator complex protein 1-like isoform X1 [Acropora millepora] | O95163 Elongator complex protein 1 OS=Homo sapiens OX=9606 GN=ELP1 | JBrowse |
| Acropora microphthalma | amic_s0149.g46.t2 | XP_029186073.2 | elongator complex protein 1-like isoform X1 [Acropora millepora] | O95163 Elongator complex protein 1 OS=Homo sapiens OX=9606 GN=ELP1 | JBrowse |
| Acropora microphthalma | amic_s0149.g46.t3 | XP_029186073.2 | elongator complex protein 1-like isoform X1 [Acropora millepora] | O95163 Elongator complex protein 1 OS=Homo sapiens OX=9606 GN=ELP1 | JBrowse |
