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This orthogroup contains 299 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 299 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR18934 | ATP-DEPENDENT RNA HELICASE | 204 / 299 | 68.2% | 91.9% of 222 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 180 / 299 | 60.2% | 82.6% of 218 | ≥50% support |
| Pfam | PF00270 | DEAD | 174 / 299 | 58.2% | 79.8% of 218 | ≥50% support |
| Pfam | PF00567 | TUDOR | 171 / 299 | 57.2% | 78.4% of 218 | ≥50% support |
| Pfam | PF21010 | HA2_C — Helicase associated domain (HA2), ratchet-like | 167 / 299 | 55.9% | 76.6% of 218 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 204 / 299 | 68.2% | 98.1% of 208 | ≥50% support |
| GO | GO:0004386 Molecular Function | helicase activity | 204 / 299 | 68.2% | 98.1% of 208 | ≥50% support |
| GO | GO:0005622 Cellular Component | intracellular anatomical structure | 204 / 299 | 68.2% | 98.1% of 208 | ≥50% support |
| GO | GO:0010529 Biological Process | obsolete negative regulation of transposition | 204 / 299 | 68.2% | 98.1% of 208 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 176 / 299 | 58.9% | 84.6% of 208 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 174 / 299 | 58.2% | 83.7% of 208 | ≥50% support |
| KEGG | K18408 | TDRD9 — Chromosome and associated proteins | 155 / 299 | 51.8% | 96.9% of 160 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora microphthalma | amic_s0103.g13.t1 | XP_044163458.1 | LOW QUALITY PROTEIN: ATP-dependent RNA helicase TDRD9-like [Acropora millepora] | Q8NDG6 ATP-dependent RNA helicase TDRD9 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora microphthalma | amic_s0103.g13.t2 | XP_044163458.1 | LOW QUALITY PROTEIN: ATP-dependent RNA helicase TDRD9-like [Acropora millepora] | Q8NDG6 ATP-dependent RNA helicase TDRD9 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora microphthalma | amic_s0103.g13.t3 | XP_044163458.1 | LOW QUALITY PROTEIN: ATP-dependent RNA helicase TDRD9-like [Acropora millepora] | Q8NDG6 ATP-dependent RNA helicase TDRD9 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora microphthalma | amic_s0103.g13.t4 | XP_044163458.1 | LOW QUALITY PROTEIN: ATP-dependent RNA helicase TDRD9-like [Acropora millepora] | Q8NDG6 ATP-dependent RNA helicase TDRD9 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora microphthalma | amic_s4593.g1.t1 | XP_015780283.1 | PREDICTED: putative ATP-dependent RNA helicase TDRD9 [Acropora digitifera] | – | JBrowse |
